RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 CPAMD8Q8IZJ3 1885 aa13.95□□□□□ -0.18
RPUSD3-208ENST00000433972 A0A087X1B8 175 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 EXOC1LA0A1B0GW35 172 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 PRRG2O14669 202 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 ASNA1O43681 348 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 NME2P1O60361 137 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 H2AFYO75367 372 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 S100BP04271 92 aaPredicted RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 SERPINA6P08185 405 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 PRF1P14222 555 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 GNAZP19086 355 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 NME2P22392 152 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 SERPINB8P50452 374 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 EFTUD2Q15029 972 aaKnown RBP eCLIP13.94□□□□□ -0.181e-6■■□□□ 13.9
RPUSD3-208ENST00000433972 RBBP5Q15291 538 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 TERF2Q15554 542 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 ZKSCAN8Q15776 578 aaPredicted RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 FAM83EQ2M2I3 478 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 NXPE4Q6UWF7 544 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 SBSNQ6UWP8 590 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 THOC6Q86W42 341 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 GPSM1Q86YR5 675 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 LRRN4CLQ8ND94 238 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 ANKRD49Q8WVL7 239 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 SLC44A1Q8WWI5 657 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 SEC16BQ96JE7 1060 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 FAR2Q96K12 515 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 TSNARE1Q96NA8 513 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 NPAS2Q99743 824 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 CAPS2Q9BXY5 557 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 DEFB126Q9BYW3 111 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 TRIM45Q9H8W5 580 aaPredicted RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 TINAGQ9UJW2 476 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 MRPS33Q9Y291 106 aaKnown RBP13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 MEMO1Q9Y316 297 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 OARD1Q9Y530 152 aa13.94□□□□□ -0.18
RPUSD3-208ENST00000433972 TCRBV16S1A1N1A0A5B0 115 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CCDC189A1A4V9 331 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 NPEPPSL1A6NEC2 478 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 KLRC4-KLRK1H3BQV0 150 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CDC7O00311 574 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CLDN4O14493 209 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 RIPK2O43353 540 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CLDN14O95500 239 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 LTA4HP09960 611 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 GRNP28799 593 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 TPP2P29144 1249 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 TRHRP34981 398 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 HLCSP50747 726 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CLCN2P51788 898 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 MLF1P58340 268 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 RAB8AP61006 207 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 OLR1P78380 273 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 RCN2Q14257 317 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CDKL4Q5MAI5 379 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 KLC3Q6P597 504 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 PHF10Q8WUB8 498 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 PAFAH2Q99487 392 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 NPLQ9BXD5 320 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 HES7Q9BYE0 225 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 PITHD1Q9GZP4 211 aaPredicted RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 CNOT10Q9H9A5 744 aaKnown RBP13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 COQ3Q9NZJ6 369 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 ZNF180Q9UJW8 692 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 SLC22A14Q9Y267 594 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 ABCA12Q86UK0 2595 aa13.93□□□□□ -0.18
RPUSD3-208ENST00000433972 E9PLN8 166 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 FAM153BP0C7A2 387 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 CD1DP15813 335 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 SSTR2P30874 369 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 HNF4AP41235 474 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 ADORA2A-AS1P86434 159 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 SLC29A2Q14542 456 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 TSNQ15631 228 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 PPP1R3AQ16821 1122 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 FAM153CQ494X1 144 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 CMC1Q7Z7K0 106 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 SIAH3Q8IW03 269 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 KRT78Q8N1N4 520 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 ARMC10Q8N2F6 343 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 B3GNT7Q8NFL0 401 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 GAL3ST3Q96A11 431 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 KIAA1191Q96A73 305 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 MTFMTQ96DP5 389 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 UBXN10Q96LJ8 280 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 VKORC1Q9BQB6 163 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 TSPAN10Q9H1Z9 355 aaPredicted RBP13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 VPS11Q9H270 941 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 SNX15Q9NRS6 342 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 RNF112Q9ULX5 631 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 CSMD1Q96PZ7 3565 aa13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
RPUSD3-208ENST00000433972 CACNA1DQ01668 2161 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms