RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 AGPAT4Q9NRZ5 378 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 KCMF1Q9P0J7 381 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF223Q9UK11 482 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-204ENST00000430682 DNAJC13O75165 2243 aa11.72□□□□□ -0.53
SMPD4-204ENST00000430682 A0A096LPK6 155 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 A1L4Q6 167 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 URADA6NGE7 173 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 ANKDD1BA6NHY2 528 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 K7EPI3 171 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 CYR61O00622 381 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 KLK8O60259 260 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 PRAMEF2O60811 474 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 CLDN1O95832 211 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 UQCRHP07919 91 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 EDN3P14138 238 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 JAK1P23458 1154 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 MAGEA12P43365 314 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 GPR143P51810 404 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 LIM2P55344 173 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 STXBP1P61764 594 aaKnown RBP11.71□□□□□ -0.53
SMPD4-204ENST00000430682 IRF8Q02556 426 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 PCDH1Q08174 1060 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 TBCCQ15814 346 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 EXT1Q16394 746 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 SPINK14Q6IE38 97 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 LRRC70Q7Z2Q7 622 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 TBC1D1Q86TI0 1168 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-204ENST00000430682 LAS2Q8IYD9 372 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 FAM47BQ8NA70 645 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 APCDD1LQ8NCL9 501 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 LRRN4CLQ8ND94 238 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 OR7G3Q8NG95 312 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 SLC44A1Q8WWI5 657 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 IFT81Q8WYA0 676 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 ZNF354BQ96LW1 612 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 MAPKAP1Q9BPZ7 522 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 EFCAB11Q9BUY7 163 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 CAPS2Q9BXY5 557 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 REXO4Q9GZR2 422 aaKnown RBP11.71□□□□□ -0.53
SMPD4-204ENST00000430682 CDCP1Q9H5V8 836 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 CLK4Q9HAZ1 481 aaKnown RBP11.71□□□□□ -0.53
SMPD4-204ENST00000430682 OSGIN2Q9Y236 505 aa11.71□□□□□ -0.53
SMPD4-204ENST00000430682 APCP25054 2843 aa11.71□□□□□ -0.54
SMPD4-204ENST00000430682 FREM3P0C091 2139 aa11.71□□□□□ -0.54
SMPD4-204ENST00000430682 NCOA6Q14686 2063 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-204ENST00000430682 ADGRG4Q8IZF6 3080 aa11.71□□□□□ -0.54
SMPD4-204ENST00000430682 A0A087X1B8 175 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SAGE2PA6NJ88 616 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 GABRR3A8MPY1 467 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SAP18O00422 153 aaKnown RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 PRKNO60260 465 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NEURL1O76050 574 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 KLHL2O95198 593 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SIX3O95343 332 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 TGFB1P01137 390 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 S100BP04271 92 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 COL8A1P27658 744 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 MSH2P43246 934 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 RAB38P57729 211 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 KCNK10P57789 538 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SKP1P63208 163 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SETDB1Q15047 1291 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF766Q5HY98 468 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 TECRLQ5HYJ1 363 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NIPAL1Q6NVV3 410 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 C16orf47Q6ZP98 133 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 CLNKQ7Z7G1 428 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 TEX9Q8N6V9 391 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 TTLQ8NG68 377 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 RHEBL1Q8TAI7 183 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 DCAKDQ8WVC6 231 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 SREK1Q8WXA9 508 aaKnown RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NR4A3Q92570 626 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 FAR2Q96K12 515 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NPLQ9BXD5 320 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 PITHD1Q9GZP4 211 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 KLHL1Q9NR64 748 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 OLAHQ9NV23 265 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 OPTCQ9UBM4 332 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 PLEKHB1Q9UF11 243 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-204ENST00000430682 DAPP1Q9UN19 280 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NCKAP5O14513 1909 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 ABCA12Q86UK0 2595 aa11.7□□□□□ -0.54
SMPD4-204ENST00000430682 NINQ8N4C6 2090 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 TMEM200CA6NKL6 621 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 B3GALT2O43825 422 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 MYO1DO94832 1006 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SBK3P0C264 359 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 CTAGE8P0CG41 777 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 PCNAP12004 261 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 ATP5A1P25705 553 aaKnown RBP11.69□□□□□ -0.54
SMPD4-204ENST00000430682 GSTM2P28161 218 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 GCAP28676 217 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 TPP2P29144 1249 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms