RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 ERV3-1Q14264 604 aa23.13■■□□□ 1.29
VEGFA-209ENST00000425836 ACOT4Q8N9L9 421 aa23.13■■□□□ 1.29
VEGFA-209ENST00000425836 ZSCAN1Q8NBB4 408 aa23.13■■□□□ 1.29
VEGFA-209ENST00000425836 PEX11GQ96HA9 241 aa23.13■■□□□ 1.29
VEGFA-209ENST00000425836 ZNF717Q9BY31 904 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-209ENST00000425836 ZNF395Q9H8N7 513 aaPredicted RBP23.13■■□□□ 1.29
VEGFA-209ENST00000425836 C14orf105Q9NVL8 296 aa23.13■■□□□ 1.29
VEGFA-209ENST00000425836 SERTM1A2A2V5 107 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 LYPLA1O75608 230 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-209ENST00000425836 SEMA3DO95025 777 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 SCELO95171 688 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 HIST1H1TP22492 207 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-209ENST00000425836 BSGP35613 385 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 SSR2P43308 183 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 ABCE1P61221 599 aaKnown RBP23.12■■□□□ 1.29
VEGFA-209ENST00000425836 MC1RQ01726 317 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 CSTF3Q12996 717 aaKnown RBP23.12■■□□□ 1.29
VEGFA-209ENST00000425836 GBP7Q8N8V2 638 aaPredicted RBP23.12■■□□□ 1.29
VEGFA-209ENST00000425836 ACPTQ9BZG2 426 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 C20orf27Q9GZN8 174 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 TRAF6Q9Y4K3 522 aa23.12■■□□□ 1.29
VEGFA-209ENST00000425836 LAMA5O15230 3695 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 ATP8B1O43520 1251 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 IL10P22301 178 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 TSFMP43897 325 aaKnown RBP23.11■■□□□ 1.29
VEGFA-209ENST00000425836 PPP2R2AP63151 447 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 CXADRP78310 365 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 STX3Q13277 289 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 SSPNQ14714 243 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 CRTC2Q53ET0 693 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-209ENST00000425836 ATP1A1-AS1Q5TC04 95 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 KANK2Q63ZY3 851 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 CLYBLQ8N0X4 340 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 TBC1D20Q96BZ9 403 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 CRELD1Q96HD1 420 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 OR1F2PQ96R84 312 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 MRPL1Q9BYD6 325 aaKnown RBP23.11■■□□□ 1.29
VEGFA-209ENST00000425836 VPS29Q9UBQ0 182 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 ZDHHC2Q9UIJ5 367 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 FIS1Q9Y3D6 152 aa23.11■■□□□ 1.29
VEGFA-209ENST00000425836 TMEM233B4DJY2 109 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 EEDO75530 441 aaKnown RBP23.1■■□□□ 1.29
VEGFA-209ENST00000425836 HSPA4LO95757 839 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 FURINP09958 794 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 PRKAR1AP10644 381 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 RNH1P13489 461 aaKnown RBP23.1■■□□□ 1.29
VEGFA-209ENST00000425836 SLC1A6P48664 564 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 TBL3Q12788 808 aaKnown RBP23.1■■□□□ 1.29
VEGFA-209ENST00000425836 UGT8Q16880 541 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 SH2D4BQ5SQS7 431 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 ADAMTS17Q8TE56 1095 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 SNRNP27Q8WVK2 155 aaKnown RBP23.1■■□□□ 1.29
VEGFA-209ENST00000425836 RBCK1Q9BYM8 510 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 DDX31Q9H8H2 851 aaKnown RBP23.1■■□□□ 1.29
VEGFA-209ENST00000425836 NMRK1Q9NWW6 199 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 C3orf18Q9UK00 162 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 DAPP1Q9UN19 280 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 DNAJC15Q9Y5T4 150 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 LIM2P55344 173 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 HMGCS1Q01581 520 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 BST1Q10588 318 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 UGT3A2Q3SY77 523 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 C19orf48Q6RUI8 117 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 TRIM46Q7Z4K8 759 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 METTL4Q8N3J2 472 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 AGR3Q8TD06 166 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 CRB3Q9BUF7 120 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 LANCL2Q9NS86 450 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 AHSPQ9NZD4 102 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 KCMF1Q9P0J7 381 aa23.1■■□□□ 1.29
VEGFA-209ENST00000425836 CDC14CA4D256 554 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 IDSB3KWA1 339 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 FAM227AF5H4B4 570 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 FHP07954 510 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 EFNA3P52797 238 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 EMP2P54851 167 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 CDC20Q12834 499 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 SLAMF1Q13291 335 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 ZCCHC7Q8N3Z6 543 aaKnown RBP23.09■■□□□ 1.29
VEGFA-209ENST00000425836 SORT1Q99523 831 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 TUBB1Q9H4B7 451 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 LYRM4Q9HD34 91 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 MKL2Q9ULH7 1088 aa23.09■■□□□ 1.29
VEGFA-209ENST00000425836 CFAP47Q6ZTR5 3102 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 A0A0A6YYD5 115 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 OR2W5A6NFC9 320 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 OTX2P32243 289 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 RAB38P57729 211 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 MINDY4Q4G0A6 757 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 MED25Q71SY5 747 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 NUDT13Q86X67 352 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 RAB3IL1Q8TBN0 382 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 CHTF18Q8WVB6 975 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 MAPKAP1Q9BPZ7 522 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 VN1R1Q9GZP7 353 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 PRORYQ9H606 182 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 MANSC1Q9H8J5 431 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 SEMA3GQ9NS98 782 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 PTGDR2Q9Y5Y4 395 aa23.08■■□□□ 1.29
VEGFA-209ENST00000425836 MAP1BP46821 2468 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms