RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TERF2Q15554 542 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 XKR6Q5GH73 641 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 PCID2Q5JVF3 399 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 POMZP3Q6PJE2 187 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 KIAA1328Q86T90 577 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 P3H2Q8IVL5 708 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 PHC2Q8IXK0 858 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 TXLNBQ8N3L3 684 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 GIMAP7Q8NHV1 300 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 ASB11Q8WXH4 323 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 ASB15Q8WXK1 588 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 NCLNQ969V3 563 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 VMP1Q96GC9 406 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 FAM173AQ9BQD7 235 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 LDAHQ9H6V9 325 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 IL1RL2Q9HB29 575 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 MTRF1LQ9UGC7 380 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 PPIEQ9UNP9 301 aaKnown RBP11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 CRYL1Q9Y2S2 319 aa11.9□□□□□ -0.5
CHRNA1-203ENST00000409219 TRIM64A6NGJ6 449 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 TRIM64BA6NI03 449 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 KDM4EB2RXH2 506 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 GOLGA8KD6RF30 607 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 E5RI56 91 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 GOLGA8TH3BQL2 631 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 GFYI3L273 518 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CEP104O60308 925 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 ZNF888P0CJ79 500 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CDH1P12830 882 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 NMBRP28336 390 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 MAGEA1P43355 309 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 DNASE1L1P49184 302 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CLCN7P51798 805 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 GPR143P51810 404 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 WNT3P56703 355 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 SKP1P63208 163 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 KLF1Q13351 362 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CUL1Q13616 776 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 HYAL4Q2M3T9 481 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 ZNF750Q32MQ0 723 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 PRELID2Q8N945 189 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 MFSD9Q8NBP5 474 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 TNIP2Q8NFZ5 429 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 RASL10BQ96S79 203 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 ZFATQ9P243 1243 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 TRGV5A0A0B4J1U4 118 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 E7EVH7 732 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CNR1P21554 472 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 FDFT1P37268 417 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CETN2P41208 172 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 SORDQ00796 357 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 SLC10A1Q14973 349 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 WHAMMP3Q1A5X7 153 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 C17orf64Q86WR6 236 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 FBXW8Q8N3Y1 598 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CEP112Q8N8E3 955 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 SREK1Q8WXA9 508 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 YIPF4Q9BSR8 244 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 LACRTQ9GZZ8 138 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 EXO5Q9H790 373 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 SEMA4BQ9NPR2 832 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 TUBA8Q9NY65 449 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 MYOTQ9UBF9 498 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 GUCA1BQ9UMX6 200 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 PCDHGB3Q9Y5G1 929 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 PCDHA13Q9Y5I0 950 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 CLDN16Q9Y5I7 305 aa11.89□□□□□ -0.51
CHRNA1-203ENST00000409219 TGFBR3LH3BV60 316 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 ZBTB14O43829 449 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 HCN1O60741 890 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 CCL3P10147 92 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 RNH1P13489 461 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 H2AFXP16104 143 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 PPP2R1BP30154 601 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 GRK3P35626 688 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 ZNF136P52737 540 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 PWP1Q13610 501 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 NIPAL1Q6NVV3 410 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 MBOAT1Q6ZNC8 495 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 RTL4Q6ZR62 310 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 FAM47EQ6ZV65 393 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 PRUNE1Q86TP1 453 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 KIF18BQ86Y91 864 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 ATG4AQ8WYN0 398 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 KIAA1191Q96A73 305 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 SCYL1Q96KG9 808 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 CAPZA3Q96KX2 299 aa11.88□□□□□ -0.51
CHRNA1-203ENST00000409219 CCDC77Q9BR77 488 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms