RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 E5RI56 91 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 SCO2O43819 266 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 PSIP1O75475 530 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 SNRPAP09012 282 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 ERVK-10P10266 1014 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 PAMP19021 973 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 AGXTP21549 392 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 IVDP26440 423 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 GABRB3P28472 473 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 OR1D4P47884 311 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 VSX2P58304 361 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 THOC5Q13769 683 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 CYP2A13Q16696 494 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 Q3ZCU0 254 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 CCDC58Q4VC31 144 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 PPP1R32Q7Z5V6 425 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 TICAM1Q8IUC6 712 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 PPIL6Q8IXY8 311 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 CPNE9Q8IYJ1 553 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 FAM9CQ8IZT9 166 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 KIF2BQ8N4N8 673 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 AMER2Q8N7J2 671 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 MINDY2Q8NBR6 621 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 OR9A1PQ8NGU1 263 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 ENKURQ8TC29 256 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 CD200R1Q8TD46 325 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 UTP4Q969X6 686 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 TLCD1Q96CP7 247 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 ZNF285Q96NJ3 590 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 GPR21Q99679 349 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 DPH2Q9BQC3 489 aaPredicted RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 SELENOSQ9BQE4 189 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 NDC1Q9BTX1 674 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 SLC25A23Q9BV35 468 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 RBM38Q9H0Z9 239 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 INTS10Q9NVR2 710 aaKnown RBP9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 RNF14Q9UBS8 474 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 CTSFQ9UBX1 484 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 NDOR1Q9UHB4 597 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 ANAPC2Q9UJX6 822 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 B3GNT3Q9Y2A9 372 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 MAU2Q9Y6X3 613 aa9.21□□□□□ -0.93
NIF3L1-202ENST00000409020 MAGEB16A2A368 324 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FAM172BPA6NC97 362 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 H3BMM5 538 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DNALI1O14645 258 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KPNA5O15131 536 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CEACAM4O75871 244 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC16A8O95907 504 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 HBQ1P09105 142 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ZCCHC18P0CG32 403 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ERGP11308 486 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CLK3P49761 638 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PGDP52209 483 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TSTA3Q13630 321 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PTK6Q13882 451 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PRR30Q53SZ7 412 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 RBM20Q5T481 1227 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FBXO42Q6P3S6 717 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CYHR1Q6ZMK1 362 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 MBOAT1Q6ZNC8 495 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CREG2Q8IUH2 290 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 OR2Y1Q8NGV0 311 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CDC26Q8NHZ8 85 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 PROKR1Q8TCW9 393 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ZNF480Q8WV37 535 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SEC14L1Q92503 715 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DLG3Q92796 817 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CIDECQ96AQ7 238 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SLC22A18Q96BI1 424 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FOPNLQ96NB1 174 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 HS3ST6Q96QI5 342 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ELAC2Q9BQ52 826 aaKnown RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TRIM15Q9C019 465 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 KCNN2Q9H2S1 579 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 RAD21L1Q9H4I0 556 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 DENND2DQ9H6A0 471 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CUTCQ9NTM9 273 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 GPN3Q9UHW5 284 aaPredicted RBP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ADAMTS6Q9UKP5 1117 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CCDC88CQ9P219 2028 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 A0A1B0GX78 115 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CES2O00748 559 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FFAR3O14843 346 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 TP73O15350 636 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 GPR42O15529 346 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 JRKO75564 520 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 STATHP02808 62 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 FOLR3P41439 243 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 HSPA13P48723 471 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 ETV1P50549 477 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 CDKN2DP55273 166 aa9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 SRSF1Q07955 248 aaKnown RBP eCLIP9.2□□□□□ -0.947e-6■□□□□ 10.7
NIF3L1-202ENST00000409020 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.94
NIF3L1-202ENST00000409020 NKG7Q16617 165 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms