RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 CRB3Q9BUF7 120 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 C14orf105Q9NVL8 296 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 KCTD5Q9NXV2 234 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 OR6C2Q9NZP2 312 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 COPS3Q9UNS2 423 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 PIN4Q9Y237 131 aaKnown RBP5.65□□□□□ -1.51
HDAC9-203ENST00000406072 RPH3AQ9Y2J0 694 aaPredicted RBP5.65□□□□□ -1.51
HDAC9-203ENST00000406072 PTPRJQ12913 1337 aa5.65□□□□□ -1.51
HDAC9-203ENST00000406072 MYADML2A6NDP7 307 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CPSF4LA6NMK7 179 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PROM1O43490 865 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SNAPC5O75971 98 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TRBC1P01850 177 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 INHAP05111 366 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SLC35E2BP0CK96 405 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PIM1P11309 404 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 BMP1P13497 986 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CTRB1P17538 263 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GRK4P32298 578 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CD79BP40259 229 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PNPLA4P41247 253 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CHRNA4P43681 627 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ANXA11P50995 505 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SMSP52788 366 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PRKAG1P54619 331 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GP2P55259 537 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TBX4P57082 545 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 DNAJB13P59910 316 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 RPS14P62263 151 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 POU4F2Q12837 409 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 MAD2L1BPQ15013 274 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CPTPQ5TA50 214 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CTRB2Q6GPI1 263 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CYS1Q717R9 158 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 DPPA2Q7Z7J5 298 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 LAX1Q8IWV1 398 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GPALPP1Q8IXQ4 340 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ZFP82Q8N141 532 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 DYNC2LI1Q8TCX1 351 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 NDRG1Q92597 394 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TMEM125Q96AQ2 219 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 LRCH3Q96II8 777 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 DPYSL5Q9BPU6 564 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TREX2Q9BQ50 279 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ELOVL4Q9GZR5 314 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 XYLT2Q9H1B5 865 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 HMX1Q9NP08 348 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SDHAF2Q9NX18 166 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 UXTQ9UBK9 157 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CITO14578 2027 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GLYATL1P3A0A0U1RQE8 302 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CBX4O00257 560 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GPR182O15218 404 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CAPN5O15484 640 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 LCMT2O60294 686 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ENTPD6O75354 484 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 NME6O75414 186 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PAPLNO95428 1278 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 VNN2O95498 520 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 WDPCPO95876 746 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 EOMESO95936 686 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GSRP00390 522 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GLAP06280 429 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 USP17L7P0C7H9 530 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SYN1P17600 705 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PCSK1P29120 753 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 KCNQ1P51787 676 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 XKP51811 444 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 HK3P52790 923 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 GBX2P52951 348 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ABHD18Q0P651 414 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TUBB3Q13509 450 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 KRT33BQ14525 404 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SF3A2Q15428 464 aaKnown RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 USP41Q3LFD5 358 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PAGE3Q5JUK9 113 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 FBXO47Q5MNV8 452 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 C6orf136Q5SQH8 315 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ATAT1Q5SQI0 421 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 C1orf189Q5VU69 101 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 NXNL2Q5VZ03 156 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 KIAA1161Q6NSJ0 714 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 CRYBG2Q8N1P7 616 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PQLC3Q8N755 202 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 TP53I13Q8NBR0 393 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 IL17RDQ8NFM7 739 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 OR7G2Q8NG99 324 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PPP1R13LQ8WUF5 828 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 C3orf49Q96BT1 292 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 FEVQ99581 238 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 SEC22CQ9BRL7 303 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ACTR6Q9GZN1 396 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 MINDY3Q9H8M7 445 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 RAD18Q9NS91 495 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 POT1Q9NUX5 634 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 ASH2LQ9UBL3 628 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 STUB1Q9UNE7 303 aa5.64□□□□□ -1.51
HDAC9-203ENST00000406072 PRELID3BQ9Y3B1 194 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms