RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 FBLIM1Q8WUP2 373 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 SLC38A4Q969I6 547 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 VPS35Q96QK1 796 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 CEP44Q9C0F1 390 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 NECTIN3Q9NQS3 549 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF226Q9NYT6 803 aa16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 PCYT1BQ9Y5K3 369 aaPredicted RBP16.31■□□□□ 0.2
SNRNP70-202ENST00000401730 PCM1Q15154 2024 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 FEZF1A0PJY2 475 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 FAM47E-STBD1D6RA91 191 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 RGS5O15539 181 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 SSX4O60224 188 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 MMP20O60882 483 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 NPPBP16860 134 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 IFI44LQ53G44 452 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 GCNT6Q5T4J0 391 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 AGAP7PQ5VUJ5 663 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 GRHL2Q6ISB3 625 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 FAHD1Q6P587 224 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 SLCO4C1Q6ZQN7 724 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 GATAD2AQ86YP4 633 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ELMOD1Q8N336 334 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 PHF10Q8WUB8 498 aaKnown RBP16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF296Q8WUU4 475 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF566Q969W8 418 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF556Q9HAH1 456 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ANKMY1Q9P2S6 941 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ERVW-1Q9UQF0 538 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 TRBC2A0A5B9 178 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 WWP2O00308 870 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ALOX5P09917 674 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 NNMTP40261 264 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 WDR53Q7Z5U6 358 aaPredicted RBP16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 B3GNT7Q8NFL0 401 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 HRASLS5Q96KN8 279 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 DNAJC27Q9NZQ0 273 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 MYO10Q9HD67 2058 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 H3BN98 237 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 LATO43561 262 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 LATS1O95835 1130 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 GASTP01350 101 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 SEMG1P04279 462 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 AZGP1P25311 298 aaKnown RBP16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 SLC7A9P82251 487 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 LSM11P83369 360 aaKnown RBP eCLIP16.3■□□□□ 0.22e-11■■■□□ 18.7
SNRNP70-202ENST00000401730 MXD1Q05195 221 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 TSTQ16762 297 aaKnown RBP16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF404Q494X3 552 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 TMC5Q6UXY8 1006 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 DEF8Q6ZN54 512 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 DNAJC22Q8N4W6 341 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 VN1R2Q8NFZ6 395 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 CHTF18Q8WVB6 975 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 WFDC6Q9BQY6 131 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 GABARAPL1Q9H0R8 117 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 ASF1AQ9Y294 204 aa16.3■□□□□ 0.2
SNRNP70-202ENST00000401730 A0A1W2PRB8 838 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 GLOD5A6NK44 160 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 CTDSP2O14595 271 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PPM1DO15297 605 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 GADD45GO95257 159 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 BCHEP06276 602 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 CYP2A6P11509 494 aaPredicted RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 MVDP53602 400 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 DBPQ10586 325 aaPredicted RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 STEAP3Q658P3 488 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 CPXM2Q8N436 756 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 S100ZQ8WXG8 99 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 YIPF4Q9BSR8 244 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 SLC6A16Q9GZN6 736 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 REEP4Q9H6H4 257 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 ERVK13-1Q9NX77 482 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PSORS1C1Q9UIG5 152 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 DYRK1BQ9Y463 629 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 MYO15AQ9UKN7 3530 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PIPSLA2A3N6 862 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PSIP1O75475 530 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 ADORA3P0DMS8 318 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 SYN1P17600 705 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 ACVR2AP27037 513 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PSMB5P28074 263 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 CNR2P34972 360 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 GGT2P36268 569 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PRKAG1P54619 331 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 ZNF763Q0D2J5 394 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 ELP6Q0PNE2 266 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PTGES3Q15185 160 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PTCHD4Q6ZW05 846 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PARS2Q7L3T8 475 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 WDR36Q8NI36 951 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 C16orf78Q8WTQ4 265 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 EXOSC8Q96B26 276 aaKnown RBP16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 TM7SF3Q9NS93 570 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 TDP1Q9NUW8 608 aa16.29■□□□□ 0.2
SNRNP70-202ENST00000401730 PCDHGB1Q9Y5G3 927 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms