RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 EDEM2Q9BV94 578 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 REEP4Q9H6H4 257 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 DOCK2Q92608 1830 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 LOC102723532A0A0G2JNH3 316 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 RCCD1A6NED2 376 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 EIF3FO00303 357 aaPredicted RBP7.65□□□□□ -1.19
USP47-203ENST00000399455 SEC14L5O43304 696 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 CSTAP01040 98 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 RLN1P04808 185 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 DCKP27707 260 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 ENTPD1P49961 510 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 AGTR2P50052 363 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 CSNK2A1P68400 391 aaPredicted RBP7.65□□□□□ -1.19
USP47-203ENST00000399455 CDK3Q00526 305 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 EEF1A2Q05639 463 aaKnown RBP7.65□□□□□ -1.19
USP47-203ENST00000399455 C5orf22Q49AR2 442 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 ARL13AQ5H913 290 aaPredicted RBP7.65□□□□□ -1.19
USP47-203ENST00000399455 EGFLAMQ63HQ2 1017 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 LCTLQ6UWM7 567 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 GPRIN1Q7Z2K8 1008 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 TMEM17Q86X19 198 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 IRF2BP1Q8IU81 584 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 DCBLD1Q8N8Z6 715 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 NUP43Q8NFH3 380 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 ARMC5Q96C12 935 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 SLC46A2Q9BY10 475 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 KCND1Q9NSA2 647 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 GIN1Q9NXP7 522 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 SPATA2Q9UM82 520 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 WDR45Q9Y484 360 aa7.65□□□□□ -1.19
USP47-203ENST00000399455 DAPL1A0PJW8 107 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ZNF860A6NHJ4 632 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 LOC730098B7Z3J9 87 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SCRG1O75711 98 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DDCP20711 480 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CHRNB4P30926 498 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 MC3RP41968 323 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC15A1P46059 708 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC6A11P48066 632 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 MECP2P51608 486 aaKnown RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 SCAPQ12770 1279 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CBFBQ13951 182 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ZIK1Q3SY52 487 aaPredicted RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 CYP27C1Q4G0S4 372 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 YIPF7Q8N8F6 280 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CDK15Q96Q40 435 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CD180Q99467 661 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OSBPL11Q9BXB4 747 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 HDAC8Q9BY41 377 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CDH22Q9UJ99 828 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 C2orf92A0A1B0GVN3 265 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 TEX46H3BTG2 121 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC30A4O14863 429 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 BCKDKO14874 412 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 VASPP50552 380 aaPredicted RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 RPL13AP3Q6NVV1 102 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 PDZD3Q86UT5 571 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 AMER2Q8N7J2 671 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 IL17RCQ8NAC3 791 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 GNPDA2Q8TDQ7 276 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 COX4I2Q96KJ9 171 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SCGB3A2Q96PL1 93 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ZNF559Q9BR84 538 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ACTRT3Q9BYD9 372 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 FN3KQ9H479 309 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 POT1Q9NUX5 634 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 CPNE7Q9UBL6 633 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 EGFL7Q9UHF1 273 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 MRPS7Q9Y2R9 242 aaKnown RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 TP73O15350 636 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ZMPSTE24O75844 475 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SEC24AO95486 1093 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 BMP6P22004 513 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 IL1R2P27930 398 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SDC2P34741 201 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 PSPHP78330 225 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ABHD18Q0P651 414 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ADNP2Q6IQ32 1131 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 C1orf94Q6P1W5 598 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 IFI44Q8TCB0 444 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SCAMP4Q969E2 229 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 NXPE2Q96DL1 559 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 GORASP1Q9BQQ3 440 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DGCR6LQ9BY27 220 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 HCKP08631 526 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 ENGP17813 658 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC25A3Q00325 362 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLC14A2Q15849 920 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OCLNQ16625 522 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 DEFB134Q4QY38 66 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
USP47-203ENST00000399455 GALNTL5Q7Z4T8 443 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OR52J3Q8NH60 311 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OR5AK3PQ8NH89 298 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 TANKQ92844 425 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 RELTQ969Z4 430 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 OR51B5Q9H339 312 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 EPHX3Q9H6B9 360 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 SLCO3A1Q9UIG8 710 aa7.64□□□□□ -1.19
USP47-203ENST00000399455 WBP11Q9Y2W2 641 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms