RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 LRRC3BQ96PB8 259 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 ZNF300Q96RE9 604 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PRDM8Q9NQV8 689 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 FBXL12Q9NXK8 326 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 NDRG4Q9ULP0 352 aaKnown RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 MGAT4BQ9UQ53 548 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 IFT52Q9Y366 437 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 RNF11Q9Y3C5 154 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 HCN4Q9Y3Q4 1203 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 POLR3HQ9Y535 204 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-206ENST00000397617 PCDHGA4Q9Y5G9 962 aa5.61□□□□□ -1.51
PTPRD-206ENST00000397617 TECTAO75443 2155 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 A0A1B0GTQ1 180 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 F5H423 210 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 KCNK5O95279 499 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PCNAP12004 261 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SERPINB10P48595 397 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CDK9P50750 372 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SELENOWP63302 87 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GRIN2CQ14957 1233 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLC36A4Q6YBV0 504 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MRGPREQ86SM8 312 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OR8J1Q8NGP2 316 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OR2T11Q8NH01 316 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SUN3Q8TAQ9 357 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLC19A3Q9BZV2 496 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OR2AG1Q9H205 316 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RABL2AQ9UBK7 228 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EBF1Q9UH73 591 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RABL2BQ9UNT1 228 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CFL2Q9Y281 166 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ASPDHA6ND91 283 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GSTA4O15217 222 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SEMG1P04279 462 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CEACAM5P06731 702 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 HOXB2P14652 356 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MAGEA10P43363 369 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 AGTR2P50052 363 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CRISP3P54108 245 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CCINQ13939 588 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PTPRCAPQ14761 206 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ZXDCQ2QGD7 858 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 IQCCQ4KMZ1 466 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TCHHL1Q5QJ38 904 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ABHD17CQ6PCB6 329 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ADCK1Q86TW2 530 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ERI1Q8IV48 349 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GPBAR1Q8TDU6 330 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GPN2Q9H9Y4 310 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MAN2C1Q9NTJ4 1040 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 IKZF3Q9UKT9 509 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TMEM5Q9Y2B1 443 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 UPK1AO00322 258 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PRAMEF4O60810 478 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 APEHP13798 732 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CFL1P23528 166 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 MAPK12P53778 367 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLC9A5Q14940 896 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PRAMEF9Q5VWM5 478 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TMC5Q6UXY8 1006 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ZZZ3Q8IYH5 903 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 LIX1Q8N485 282 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SKA2Q8WVK7 121 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 NEIL2Q969S2 332 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OR4K3Q96R72 315 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PKP2Q99959 881 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SAP130Q9H0E3 1048 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GNG14A0A1W2PPG7 69 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SNX4O95219 450 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PRKAR1BP31321 381 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ADPRHP54922 357 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TTC33Q6PID6 262 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 FAM83HQ6ZRV2 1179 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TANKQ92844 425 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SLCO4A1Q96BD0 722 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 TRNT1Q96Q11 434 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 UBAP1Q9NZ09 502 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 CD207Q9UJ71 328 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PCDHB14Q9Y5E9 798 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 A0A0G2JPF8 293 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 HNRNPCL2B2RXH8 293 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 HNRNPCL3B7ZW38 293 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PPP6CO00743 305 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ACOX3O15254 700 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PDYNP01213 254 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 EIF2S1P05198 315 aaKnown RBP5.6□□□□□ -1.51
PTPRD-206ENST00000397617 HNRNPCL4P0DMR1 293 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 ACVR2AP27037 513 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 LBX1P52954 281 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 AQP4P55087 323 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 PPARDQ03181 441 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RGS1Q08116 209 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 RABL3Q5HYI8 236 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 GCNT6Q5T4J0 391 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 KIAA1614Q5VZ46 1190 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 SUSD1Q6UWL2 747 aa5.6□□□□□ -1.51
PTPRD-206ENST00000397617 OR8K5Q8NH50 307 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms