RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TNKS2Q9H2K2 1166 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ATP13A3Q9H7F0 1226 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 PCDHGB6Q9Y5F9 930 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 OR51B4Q9Y5P0 310 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 SEC14L5O43304 696 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 HTR1AP08908 422 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF30P17039 623 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 PCMT1P22061 227 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 CAPZA2P47755 286 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 SMIM11AP58511 58 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ATP13A5Q4VNC0 1218 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 LETMD1Q6P1Q0 360 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 TPRG1Q6ZUI0 275 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 RAB42Q8N4Z0 105 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF461Q8TAF7 563 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ARHGAP39Q9C0H5 1083 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 MED11Q9P086 117 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 MAU2Q9Y6X3 613 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 CHST10O43529 356 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 KIAA0513O60268 411 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 TGM1P22735 817 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ITPKAP23677 461 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 PRKAG1P54619 331 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 FCGRTP55899 365 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 TSPAN5P62079 268 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 NDUFA9Q16795 377 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 LIPJQ5W064 366 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 MOB2Q70IA6 237 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 PIM3Q86V86 326 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 MARCH9Q86YJ5 346 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 TBC1D19Q8N5T2 526 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 RPL10LQ96L21 214 aaKnown RBP5.25□□□□□ -1.57
PTPRD-205ENST00000397611 SLIRPQ9GZT3 109 aaKnown RBP5.25□□□□□ -1.57
PTPRD-205ENST00000397611 NXF2Q9GZY0 626 aaKnown RBP5.25□□□□□ -1.57
PTPRD-205ENST00000397611 DPAGT1Q9H3H5 408 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ZBTB20Q9HC78 741 aaPredicted RBP5.25□□□□□ -1.57
PTPRD-205ENST00000397611 TLR9Q9NR96 1032 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 HCN3Q9P1Z3 774 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 MAP4K5Q9Y4K4 846 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 SNX10Q9Y5X0 201 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 PTGDR2Q9Y5Y4 395 aa5.25□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF840PA6NDX5 716 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ANKDD1BA6NHY2 528 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 B8ZZF3 427 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 TLR4O00206 839 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 NIPSNAP2O75323 286 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 VIPP01282 170 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 OPN1SWP03999 348 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 IL32P24001 234 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 GADD45AP24522 165 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 CD52P31358 61 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 CSTF2P33240 577 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 SPAM1P38567 509 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 EMX1Q04741 257 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 USF2Q15853 346 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM44Q2T9K0 475 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 LAIR2Q6ISS4 152 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 GOLGA7Q7Z5G4 137 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 DTX3Q8N9I9 347 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 TNFAIP8L1Q8WVP5 186 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ECHDC3Q96DC8 303 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 MRPL48Q96GC5 212 aaKnown RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF514Q96K75 400 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 EPYCQ99645 322 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 NLNQ9BYT8 704 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 EPHX3Q9H6B9 360 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 METTL21EPA6NDL7 271 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 TOXO94900 526 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ADAP00813 363 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 DNTTP04053 509 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ITGB7P26010 798 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 PTBP1P26599 531 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 FNTBP49356 437 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ARHGAP15Q53QZ3 475 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 XKR6Q5GH73 641 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 GCNT6Q5T4J0 391 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 SLC46A3Q7Z3Q1 461 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 DDX53Q86TM3 631 aaKnown RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ZSWIM9Q86XI8 627 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 OR52L1Q8NGH7 329 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 YIPF6Q96EC8 236 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 WDR34Q96EX3 536 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 HSH2DQ96JZ2 352 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 PGLYRP2Q96PD5 576 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 PIGUQ9H490 435 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 ZDHHC3Q9NYG2 299 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 BOLA1Q9Y3E2 137 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 NARSO43776 548 aaKnown RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 TRIM3O75382 744 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 JUPP14923 745 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 LCN1P31025 176 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 HOXD11P31277 338 aaPredicted RBP5.24□□□□□ -1.57
PTPRD-205ENST00000397611 NPRL3Q12980 569 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 AQP6Q13520 282 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 RAPSNQ13702 412 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 CPTPQ5TA50 214 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 RAB12Q6IQ22 244 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 PSAPL1Q6NUJ1 521 aa5.24□□□□□ -1.57
PTPRD-205ENST00000397611 LGI4Q8N135 537 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms