RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PRAMEF13Q5VWM6 474 aa22.74■■□□□ 1.23
PABPN1-202ENST00000397276 Q6ZPB1 254 aaPredicted RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 UTS2BQ765I0 119 aa22.74■■□□□ 1.23
PABPN1-202ENST00000397276 GET4Q7L5D6 327 aaPredicted RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 HEATR4Q86WZ0 1026 aa22.74■■□□□ 1.23
PABPN1-202ENST00000397276 RPL3LQ92901 407 aaKnown RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 FGF13Q92913 245 aa22.74■■□□□ 1.23
PABPN1-202ENST00000397276 BHLHE41Q9C0J9 482 aaPredicted RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 WDR12Q9GZL7 423 aaKnown RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 RMI1Q9H9A7 625 aa22.74■■□□□ 1.23
PABPN1-202ENST00000397276 SCHIP1Q9P0W5 487 aaPredicted RBP22.74■■□□□ 1.23
PABPN1-202ENST00000397276 TMEM229AB2RXF0 380 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 FOXE1O00358 373 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 IL3P08700 152 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 CD6P30203 668 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 PRIM2P49643 509 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 NKX2-5P52952 324 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 TOP3AQ13472 1001 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 CAMK2GQ13555 558 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 FBXO46Q6PJ61 603 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 TMIGD1Q6UXZ0 262 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 Q8N9G6 341 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 NFKBIDQ8NI38 313 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 ASB16Q96NS5 453 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 PSD2Q9BQI7 771 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 GABARAPL1Q9H0R8 117 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 ITIH1P19827 911 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 CHI3L1P36222 383 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 ITGA1P56199 1179 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 GABARAPL2P60520 117 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 SLC5A12Q1EHB4 618 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 IQCCQ4KMZ1 466 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 AGAP7PQ5VUJ5 663 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 RNF130Q86XS8 419 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 TFGQ92734 400 aaPredicted RBP22.73■■□□□ 1.23
PABPN1-202ENST00000397276 DOHHQ9BU89 302 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 OR52A5Q9H2C5 316 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 TMEM245Q9H330 911 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 TAC3Q9UHF0 121 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 ATP6V1HQ9UI12 483 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 SNX8Q9Y5X2 465 aa22.73■■□□□ 1.23
PABPN1-202ENST00000397276 IGLON5A6NGN9 336 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 UBE3AQ05086 875 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 SF3B4Q15427 424 aaKnown RBP eCLIP22.72■■□□□ 1.233e-9■■■■□ 20.9
PABPN1-202ENST00000397276 FAM109BQ6ICB4 259 aaPredicted RBP22.72■■□□□ 1.23
PABPN1-202ENST00000397276 CORO2BQ9UQ03 480 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 PPIBP23284 216 aaKnown RBP22.72■■□□□ 1.23
PABPN1-202ENST00000397276 DPTQ07507 201 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 NPTX1Q15818 432 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 GPR153Q6NV75 609 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 PLEKHG7Q6ZR37 379 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 VN1R5Q7Z5H4 357 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 TSEN54Q7Z6J9 526 aaKnown RBP22.72■■□□□ 1.23
PABPN1-202ENST00000397276 AMZ2Q86W34 360 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 SETD9Q8NE22 299 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 TBC1D20Q96BZ9 403 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 ZNF514Q96K75 400 aaPredicted RBP22.72■■□□□ 1.23
PABPN1-202ENST00000397276 M0QX08 132 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 PI15O43692 258 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 PSMB5P28074 263 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 IL18R1Q13478 541 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 HTRA1Q92743 480 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 RAD51AP1Q96B01 352 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 ARMC5Q96C12 935 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 WDR34Q96EX3 536 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 VMP1Q96GC9 406 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 BTBD2Q9BX70 525 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 DPEP2Q9H4A9 486 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 GPR34Q9UPC5 381 aa22.72■■□□□ 1.23
PABPN1-202ENST00000397276 C17orf113A0A1B0GUU1 675 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 FEZF1A0PJY2 475 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 PCDH8O95206 1070 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 C9P02748 559 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 PCGF2P35227 344 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 SELENOWP63302 87 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 RPP38P78345 283 aaKnown RBP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 SCARB2Q14108 478 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 ZNF765Q7L2R6 523 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 ADCK1Q86TW2 530 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 CCDC71Q8IV32 467 aaPredicted RBP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 ZNF540Q8NDQ6 660 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 SMARCD2Q92925 531 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 LINC00615Q96LM1 132 aaPredicted RBP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 KCNC2Q96PR1 638 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 SLC6A16Q9GZN6 736 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 MIEF1Q9NQG6 463 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 CUEDC1Q9NWM3 386 aaPredicted RBP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 GABARAPO95166 117 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 CA3P07451 260 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 CCDC159P0C7I6 412 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 MAGP20916 626 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 FAM71E1Q6IPT2 247 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 PSRC1Q6PGN9 363 aaPredicted RBP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.71■■□□□ 1.23
PABPN1-202ENST00000397276 METTL4Q8N3J2 472 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 PSMA8Q8TAA3 256 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 MIR1-1HGQ9H1L0 117 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 C5AR2Q9P296 337 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 MAPRE3Q9UPY8 281 aa22.71■■□□□ 1.23
PABPN1-202ENST00000397276 A0A1W2PRB8 838 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms