RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 MDC1Q14676 2089 aaKnown RBP15.3■□□□□ 0.04
DDR1-229ENST00000396342 PPP1R3AQ16821 1122 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 XKR6Q5GH73 641 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 CDKL4Q5MAI5 379 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 SULT1C3Q6IMI6 304 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 MAATS1Q7Z4T9 603 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDR1-229ENST00000396342 CPSF7Q8N684 471 aaKnown RBP15.3■□□□□ 0.04
DDR1-229ENST00000396342 OR2L5Q8NG80 312 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 OR5L2Q8NGL0 311 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 ASB5Q8WWX0 329 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 DOCK10Q96BY6 2186 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 DIDO1Q9BTC0 2240 aaKnown RBP15.3■□□□□ 0.04
DDR1-229ENST00000396342 DERL2Q9GZP9 239 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 EHD1Q9H4M9 534 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 KLHL31Q9H511 634 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 TRIM45Q9H8W5 580 aaPredicted RBP15.3■□□□□ 0.04
DDR1-229ENST00000396342 COPS7AQ9UBW8 275 aa15.3■□□□□ 0.04
DDR1-229ENST00000396342 SPENQ96T58 3664 aaKnown RBP15.29■□□□□ 0.04
DDR1-229ENST00000396342 CENPEQ02224 2701 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 MAN1A2O60476 641 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 GRNP28799 593 aaKnown RBP15.29■□□□□ 0.04
DDR1-229ENST00000396342 KCNC1P48547 511 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 SERTAD2Q14140 314 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 TGFBIQ15582 683 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 ELAVL1Q15717 326 aaKnown RBP15.29■□□□□ 0.04
DDR1-229ENST00000396342 PDK4Q16654 411 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 ARHGAP11AQ6P4F7 1023 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 HSDL2Q6YN16 418 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 SLCO4C1Q6ZQN7 724 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 RGS9BPQ6ZS82 235 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 CAPN12Q6ZSI9 719 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 RAPH1Q70E73 1250 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 CREB3L4Q8TEY5 395 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 SDCCAG3Q96C92 435 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 RHBDF1Q96CC6 855 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 PTCD3Q96EY7 689 aaKnown RBP15.29■□□□□ 0.04
DDR1-229ENST00000396342 KCNC2Q96PR1 638 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 NPAS2Q99743 824 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 TRIM51Q9BSJ1 452 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 NECTIN3Q9NQS3 549 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 RNF112Q9ULX5 631 aa15.29■□□□□ 0.04
DDR1-229ENST00000396342 IGKV3D-11A0A0A0MRZ8 115 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 LRIT2A6NDA9 550 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 CCDC166P0CW27 439 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 PRF1P14222 555 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 CAPN3P20807 821 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 IVDP26440 423 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 SERPINB1P30740 379 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 GDF5P43026 501 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 PHEXP78562 749 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 IRF8Q02556 426 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 AP5B1Q2VPB7 878 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 GK5Q6ZS86 529 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 CHSY3Q70JA7 882 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 DOLPP1Q86YN1 238 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 SULF2Q8IWU5 870 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 CTAGE3PQ8IX95 158 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 FAM47BQ8NA70 645 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 OR14A16Q8NHC5 309 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 NCLNQ969V3 563 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 MS4A6EQ96DS6 147 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 CPNE1Q99829 537 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 SPNS1Q9H2V7 528 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 TP63Q9H3D4 680 aaPredicted RBP15.28■□□□□ 0.04
DDR1-229ENST00000396342 SLC24A3Q9HC58 644 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 MOCS1Q9NZB8 636 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 ANGPTL3Q9Y5C1 460 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 PSAT1Q9Y617 370 aa15.28■□□□□ 0.04
DDR1-229ENST00000396342 A0A0G2JN53 185 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 FOXO6A8MYZ6 492 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 EIF3HO15372 352 aaKnown RBP eCLIP15.27■□□□□ 0.045e-6■■■□□ 14.9
DDR1-229ENST00000396342 CCNT2O60583 730 aaKnown RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 CTNSO60931 367 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 SMIM10L1P0DMW3 83 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 TFEBP19484 476 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 TLX1P31314 330 aaPredicted RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 SPRP35270 261 aaPredicted RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 PGGT1BP53609 377 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 ADORA2A-AS1P86434 159 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 ZNF460Q14592 562 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 TMEM35AQ53FP2 167 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 ZNF468Q5VIY5 522 aaPredicted RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 ACAD11Q709F0 780 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 TBC1D1Q86TI0 1168 aaPredicted RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 SLC22A16Q86VW1 577 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 SIAH3Q8IW03 269 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 MORN4Q8NDC4 146 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 NFAM1Q8NET5 270 aaPredicted RBP15.27■□□□□ 0.04
DDR1-229ENST00000396342 STAG3L4Q8TBR4 150 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 FAM57AQ8TBR7 257 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 SMIM10Q96HG1 83 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 LURAP1Q96LR2 239 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 PWWP2AQ96N64 755 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 TBCDQ9BTW9 1192 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 PHACTR1Q9C0D0 580 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 SAYSD1Q9NPB0 183 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.27■□□□□ 0.04
DDR1-229ENST00000396342 SNX24Q9Y343 169 aa15.27■□□□□ 0.04
DDR1-229ENST00000396342 CACNA1DQ01668 2161 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms