RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 EEF1DP29692 281 aaKnown RBP12.88□□□□□ -0.35
CXCL12-205ENST00000395794 CASP2P42575 452 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 HSD17B7P56937 341 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 RAB38P57729 211 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 DLG1Q12959 904 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 RUNX2Q13950 521 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ACAP2Q15057 778 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 OR1C1Q15619 314 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ADPRMQ3LIE5 342 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 C4orf17Q53FE4 359 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 TMEM35AQ53FP2 167 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 GLE1Q53GS7 698 aaKnown RBP12.88□□□□□ -0.35
CXCL12-205ENST00000395794 MED27Q6P2C8 311 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ABHD17CQ6PCB6 329 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 MYLK4Q86YV6 388 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF595Q8IYB9 648 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 AMER2Q8N7J2 671 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 TMEM178AQ8NBL3 297 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 FAM98AQ8NCA5 519 aaKnown RBP12.88□□□□□ -0.35
CXCL12-205ENST00000395794 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ELP5Q8TE02 316 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 KCTD4Q8WVF5 259 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 FMO2Q99518 471 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 CENPKQ9BS16 269 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 DEFB126Q9BYW3 111 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 CDCP1Q9H5V8 836 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ACSS3Q9H6R3 686 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 NECTIN3Q9NQS3 549 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 ANKRD10Q9NXR5 420 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 NINJ2Q9NZG7 142 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 PCDHGB6Q9Y5F9 930 aa12.88□□□□□ -0.35
CXCL12-205ENST00000395794 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
CXCL12-205ENST00000395794 SHANK1Q9Y566 2161 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 IGKV3D-11A0A0A0MRZ8 115 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 A0A1B0GUH1 482 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 A1L4Q6 167 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 C4orf51C9J302 202 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 E2F3O00716 465 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 FCHO1O14526 889 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 LRRTM2O43300 516 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 MYO1DO94832 1006 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 KLHL2O95198 593 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 ACSL3O95573 720 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 GMPRP36959 345 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 CD96P40200 585 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 RBPJQ06330 500 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 TERF2Q15554 542 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 PFKFB4Q16877 469 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 VN1R5Q7Z5H4 357 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 RELL1Q8IUW5 271 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 TEX9Q8N6V9 391 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 FAM47BQ8NA70 645 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 CCDC77Q9BR77 488 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 AICDAQ9GZX7 198 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 VPS11Q9H270 941 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 PNO1Q9NRX1 252 aaKnown RBP12.87□□□□□ -0.35
CXCL12-205ENST00000395794 LRFN1Q9P244 771 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 SEC14L3Q9UDX4 400 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 ADGRE2Q9UHX3 823 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 TNPO3Q9Y5L0 923 aaKnown RBP12.87□□□□□ -0.35
CXCL12-205ENST00000395794 SCN3AQ9NY46 2000 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 DOCK10Q96BY6 2186 aa12.87□□□□□ -0.35
CXCL12-205ENST00000395794 PRAMEF4O60810 478 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 KRT38O76015 456 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 LDLRP01130 860 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 IFNA16P05015 189 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CD22P20273 847 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CERS1P27544 350 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CYB561P49447 251 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 SERPINB9P50453 376 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CLCN2P51788 898 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
CXCL12-205ENST00000395794 LIM2P55344 173 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 PHEXP78562 749 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 IRF9Q00978 393 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 STX4Q12846 297 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 PRAMEF9Q5VWM5 478 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 ZNF324BQ6AW86 544 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-205ENST00000395794 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 ADNP2Q6IQ32 1131 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 CENPLQ8N0S6 344 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-205ENST00000395794 TMEM132CQ8N3T6 1108 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 KIF2BQ8N4N8 673 aa12.86□□□□□ -0.35
CXCL12-205ENST00000395794 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
CXCL12-205ENST00000395794 C7orf57Q8NEG2 295 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms