RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 ZNF282Q9UDV7 671 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-204ENST00000395756 TMEFF2Q9UIK5 374 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-204ENST00000395756 C3orf18Q9UK00 162 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 H0YAE9 185 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 RNASET2O00584 256 aaKnown RBP17.09■□□□□ 0.33
SREBF1-204ENST00000395756 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
SREBF1-204ENST00000395756 EGFP01133 1207 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 HOXB2P14652 356 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 DAPP51397 102 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 CTBSQ01459 385 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 TTC23Q5W5X9 447 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 FAM71E1Q6IPT2 247 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 LCTLQ6UWM7 567 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 HMGN2P46Q86SG4 172 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.09■□□□□ 0.33
SREBF1-204ENST00000395756 KLHDC8AQ8IYD2 350 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 ADGRF3Q8IZF5 1079 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 FRMD1Q8N878 549 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 TMEM145Q8NBT3 493 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 C11orf65Q8NCR3 313 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.09■□□□□ 0.331e-323■■■■■ 89.8
SREBF1-204ENST00000395756 EPB41L1Q9H4G0 881 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 MAGIXQ9H6Y5 334 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 RASSF1Q9NS23 344 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 TAAR2Q9P1P5 351 aa17.09■□□□□ 0.33
SREBF1-204ENST00000395756 GCM2O75603 506 aaPredicted RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 AK4P27144 223 aaPredicted RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 RXRGP48443 463 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 CCR8P51685 355 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 MANFP55145 182 aaKnown RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 RPS21P63220 83 aaKnown RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 RAPSNQ13702 412 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 KHDRBS2Q5VWX1 349 aaKnown RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 SDE2Q6IQ49 451 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 CBLL1Q75N03 491 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 SMPDL3AQ92484 453 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 RAB8BQ92930 207 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 MRPL38Q96DV4 380 aaKnown RBP17.08■□□□□ 0.33
SREBF1-204ENST00000395756 FANCEQ9HB96 536 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 CLEC1BQ9P126 229 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 RAB23Q9ULC3 237 aa17.08■□□□□ 0.33
SREBF1-204ENST00000395756 BMP10O95393 424 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 ADH1BP00325 375 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 CEACAM5P06731 702 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 RRM2P31350 389 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 DGKEP52429 567 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 TUBA4AP68366 448 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 LRRC74AQ0VAA2 488 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 RAB39AQ14964 217 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 ERICH5Q6P6B1 374 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 Q6ZPB1 254 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-204ENST00000395756 EIF3MQ7L2H7 374 aaKnown RBP17.08■□□□□ 0.32
SREBF1-204ENST00000395756 HIPK1Q86Z02 1210 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 PARP8Q8N3A8 854 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 TP53I13Q8NBR0 393 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-204ENST00000395756 UBE2E3Q969T4 207 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 WDR34Q96EX3 536 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 DGCR6LQ9BY27 220 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 BHLHE41Q9C0J9 482 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-204ENST00000395756 EHD1Q9H4M9 534 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 REEP1Q9H902 201 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 TAS2R9Q9NYW1 312 aa17.08■□□□□ 0.32
SREBF1-204ENST00000395756 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 GPR37L1O60883 481 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 RPN2P04844 631 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 RPA4Q13156 261 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 DEPDC1Q5TB30 811 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 KIAA1324Q6UXG2 1013 aaKnown RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 SLAMF7Q9NQ25 335 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 ADPRHL2Q9NX46 363 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 TEX10Q9NXF1 929 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 THUMPD1Q9NXG2 353 aaKnown RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 SCHIP1Q9P0W5 487 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 RHCGQ9UBD6 479 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 ATP6V1HQ9UI12 483 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 SDK1Q7Z5N4 2213 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 J3KTA2 159 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 ADAM23O75077 832 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 TRMUO75648 421 aaKnown RBP17.07■□□□□ 0.32
SREBF1-204ENST00000395756 CDK4P11802 303 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 POU2F1P14859 743 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 FMO3P31513 532 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 IGFALSP35858 605 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 PIK3CBP42338 1070 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 PCDH1Q08174 1060 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 SCARB2Q14108 478 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 KLHL35Q6PF15 583 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 SLC7A5P1Q8MH63 180 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 IL17RCQ8NAC3 791 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 OR52E4Q8NGH9 312 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 ELSPBP1Q96BH3 223 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 CAMK1GQ96NX5 476 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 KLHL31Q9H511 634 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 FGF22Q9HCT0 170 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 BCKDKO14874 412 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 NTSR1P30989 418 aa17.07■□□□□ 0.32
SREBF1-204ENST00000395756 TRIM23P36406 574 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms