RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 DIO3P55073 304 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TAS2R39P59534 338 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 UFM1P61960 85 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 AMHR2Q16671 573 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 C4orf46Q504U0 113 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MFSD14CQ5VZR4 134 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 LIN54Q6MZP7 749 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 GDPGP1Q6ZNW5 385 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OTOP2Q7RTS6 562 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MAP4K3Q8IVH8 894 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR52K2Q8NGK3 314 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF671Q8TAW3 534 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ACOT11Q8WXI4 607 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SNRNP25Q9BV90 132 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 FN3KQ9H479 309 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TCRBV16S1A1N1A0A5B0 115 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 GRXCR2A6NFK2 248 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 A8MT66 165 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 NEDD8-MDP1E9PL57 170 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SLC16A6O15403 523 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 CREG1O75629 220 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 S100A3P33764 101 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 RELQ04864 619 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TWF1Q12792 350 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TAF1AQ15573 450 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TCTE1Q5JU00 501 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 REPS2Q8NFH8 660 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR4M1Q8NGD0 313 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR52J3Q8NH60 311 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TSPEARQ8WU66 669 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PYCR2Q96C36 320 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PDXPQ96GD0 296 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 FCRL1Q96LA6 429 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MOGAT1Q96PD6 335 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF471Q9BX82 626 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PURGQ9UJV8 347 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 COQ4Q9Y3A0 265 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 NWD2Q9ULI1 1742 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SLC22A23A1A5C7 686 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 BTBD17A6NE02 478 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 C5orf58C9J3I9 102 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 M0R036 132 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TNFRSF11BO00300 401 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PCDHGA12O60330 932 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 MPZL2O60487 215 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 EIF1BO60739 113 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 CYP17A1P05093 508 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ITGAMP11215 1152 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 HK1P19367 917 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 DRD5P21918 477 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 EIF1P41567 113 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 LRRC32Q14392 662 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SPHARQ15513 63 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 VMACQ2NL98 169 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF484Q5JVG2 852 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 RNF180Q86T96 592 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ADGRF3Q8IZF5 1079 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 NIPA2Q8N8Q9 360 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR56A4Q8NGH8 313 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 RAD51AP1Q96B01 352 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PYURFQ96I23 114 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TMEM68Q96MH6 324 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR52E6Q96RD3 313 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OSMRQ99650 979 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 EGFL8Q99944 293 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TBC1D17Q9HA65 648 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 TCF7L1Q9HCS4 588 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 ASAH2Q9NR71 780 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 H2AFY2Q9P0M6 372 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 SARDHQ9UL12 918 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 RUVBL1Q9Y265 456 aaKnown RBP7.35□□□□□ -1.23
VTI1A-201ENST00000393077 DHRS7Q9Y394 339 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 PCDHGB7Q9Y5F8 929 aa7.35□□□□□ -1.23
VTI1A-201ENST00000393077 OR2AT4A6NND4 320 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PHYHO14832 338 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ADAMDEC1O15204 470 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 GADD45GO95257 159 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 JCHAINP01591 159 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SPARCP09486 303 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 HSPA7P48741 367 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 PGGT1BP53609 377 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 GTF2BQ00403 316 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 SPIBQ01892 262 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NDUFAF6Q330K2 333 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 OR10H5Q8NGA6 315 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 OR4M2Q8NGB6 313 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 STK35Q8TDR2 534 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 RAB7BQ96AH8 199 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 IL4I1Q96RQ9 567 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ACOX2Q99424 681 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 ZNF670Q9BS34 389 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 NXF3Q9H4D5 531 aaKnown RBP7.34□□□□□ -1.23
VTI1A-201ENST00000393077 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 MTMR10Q9NXD2 777 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 GLTPD2A6NH11 291 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 FAM220BPB1ANY3 271 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 DSCR3O14972 297 aa7.34□□□□□ -1.23
VTI1A-201ENST00000393077 HSPA12AO43301 675 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms