RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RRM2P31350 389 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 ADRA1AP35348 466 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SLC11A1P49279 550 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 POLR2LP62875 67 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CTAG1AP78358 180 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 TIAL1Q01085 375 aaKnown RBP eCLIP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CFHR1Q03591 330 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 TOP3AQ13472 1001 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CDO1Q16878 200 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 DMRTC1Q5HYR2 192 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 OR2A2Q6IF42 318 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 SNX20Q7Z614 316 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 WFDC3Q8IUB2 231 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 BCL6BQ8N143 479 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 AMER3Q8N944 861 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 RBM41Q96IZ5 413 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 ZNF48Q96MX3 618 aaPredicted RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 CHRDL1Q9BU40 450 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 EGLN1Q9GZT9 426 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 GAL3ST2Q9H3Q3 398 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 VCX3AQ9NNX9 186 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 RAB18Q9NP72 206 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 KCNMB3Q9NPA1 279 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 EIF3KQ9UBQ5 218 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 NDRG3Q9UGV2 375 aa3.38□□□□□ -1.87
XRN1-202ENST00000392981 NOCTQ9UK39 431 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 PRPF19Q9UMS4 504 aaKnown RBP3.38□□□□□ -1.87
XRN1-202ENST00000392981 SPEGQ15772 3267 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 COL15A1P39059 1388 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 EMSYQ7Z589 1322 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SUPT6HQ7KZ85 1726 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ILVBLA1L0T0 632 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ABLIM1O14639 778 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LCMT2O60294 686 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 GLAP06280 429 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 APEHP13798 732 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 HNF1AP20823 631 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RPL13P26373 211 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLC26A3P40879 764 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 GRIA1P42261 906 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 HTR5AP47898 357 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RAP1GDS1P52306 607 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ADPRMQ3LIE5 342 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ELFN2Q5R3F8 820 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLX4IPQ5VYV7 408 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LHX8Q68G74 356 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMEM53Q6P2H8 277 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LRRC8AQ8IWT6 810 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 OR5D13Q8NGL4 314 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLC38A5Q8WUX1 472 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TSEN15Q8WW01 171 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ING5Q8WYH8 240 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ITCHQ96J02 903 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ZNF341Q9BYN7 854 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CNGB3Q9NQW8 809 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 C20orf96Q9NUD7 363 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 PRG3Q9Y2Y8 225 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 WDR45Q9Y484 360 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LOXL2Q9Y4K0 774 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 UGGT2Q9NYU1 1516 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 UBE4BO95155 1302 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MAP2K7O14733 419 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SNNO75324 88 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 PRKAR1AP10644 381 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SYT1P21579 422 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MPZP25189 248 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PTGER3P43115 390 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ALDH3B1P43353 468 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SNRPNP63162 240 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 MELKQ14680 651 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 HERC3Q15034 1050 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 GPR33Q49SQ1 333 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PHLDA2Q53GA4 152 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RNF43Q68DV7 783 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SLC29A4Q7RTT9 530 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CATSPERDQ86XM0 798 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CDKL3Q8IVW4 592 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 CLEC4FQ8N1N0 589 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CSGALNACT2Q8N6G5 542 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 FNDC5Q8NAU1 212 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 CCDC107Q8WV48 283 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ATL1Q8WXF7 558 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 TMIGD2Q96BF3 282 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LMF1Q96S06 567 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SPATA25Q9BR10 227 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 MED10Q9BTT4 135 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 NTMT1Q9BV86 223 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ST6GALNAC5Q9BVH7 336 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 LRMDAQ9H2I8 198 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PLEK2Q9NYT0 353 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 ONECUT1Q9UBC0 465 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 PIGLQ9Y2B2 252 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SIRT4Q9Y6E7 314 aaPredicted RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 A3GALT2U3KPV4 340 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RIMBP3CA6NJZ7 1639 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RIMBP3BA6NNM3 1639 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 RIMBP3Q9UFD9 1639 aa3.37□□□□□ -1.87
XRN1-202ENST00000392981 SMG6Q86US8 1419 aaKnown RBP3.37□□□□□ -1.87
XRN1-202ENST00000392981 ABCA9Q8IUA7 1624 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms