RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 L3MBTL4Q8NA19 623 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 ARMC2Q8NEN0 867 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 M1APQ8TC57 530 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 CPT1CQ8TCG5 803 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 ACMSDQ8TDX5 336 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 REPS1Q96D71 796 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 PHF21BQ96EK2 531 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 TBCDQ9BTW9 1192 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 ILKAPQ9H0C8 392 aaPredicted RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 COPS7BQ9H9Q2 264 aaPredicted RBP11.12□□□□□ -0.63
RFC4-202ENST00000392481 PRDM7Q9NQW5 492 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 LUZP4Q9P127 313 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 PTGFRNQ9P2B2 879 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
RFC4-202ENST00000392481 SPTAN1Q13813 2472 aaKnown RBP11.11□□□□□ -0.63
RFC4-202ENST00000392481 IGKV3D-11A0A0A0MRZ8 115 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 TCRBV16S1A1N1A0A5B0 115 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 H0YIV9 168 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 CLDN4O14493 209 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 MAOAP21397 527 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 CERS1P27544 350 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 RAB38P57729 211 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 ESPL1Q14674 2120 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 TLR1Q15399 786 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 INPP5JQ15735 1006 aaPredicted RBP11.11□□□□□ -0.63
RFC4-202ENST00000392481 DEPDC1Q5TB30 811 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 KHDRBS2Q5VWX1 349 aaKnown RBP11.11□□□□□ -0.63
RFC4-202ENST00000392481 UBE3DQ7Z6J8 389 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 CUZD1Q86UP6 607 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 ATCAYQ86WG3 371 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 IQCKQ8N0W5 287 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 TMEM151AQ8N4L1 468 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 HUS1BQ8NHY5 278 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 DNAJB14Q8TBM8 379 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 NOL11Q9H8H0 719 aaKnown RBP11.11□□□□□ -0.63
RFC4-202ENST00000392481 ANKZF1Q9H8Y5 726 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 PPCSQ9HAB8 311 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 LYRM4Q9HD34 91 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 PRM3Q9NNZ6 103 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 MMP25Q9NPA2 562 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 DMRT3Q9NQL9 472 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 TEKT2Q9UIF3 430 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 PCTPQ9UKL6 214 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 DAPP1Q9UN19 280 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 MRPS33Q9Y291 106 aaKnown RBP11.11□□□□□ -0.63
RFC4-202ENST00000392481 CSAG2Q9Y5P2 127 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 RELNP78509 3460 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 COL12A1Q99715 3063 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 SVILO95425 2214 aa11.11□□□□□ -0.63
RFC4-202ENST00000392481 DYTNA2CJ06 578 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 CYR61O00622 381 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 OR7A17O14581 309 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 SCELO95171 688 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 CLDN9O95484 217 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 TGFB1P01137 390 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 UQCRHP07919 91 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 SBK3P0C264 359 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 HIST1H1TP22492 207 aaPredicted RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 PTX3P26022 381 aaPredicted RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 CCNG1P51959 295 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 ARFIP1P53367 373 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 LIM2P55344 173 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 HSD17B7P56937 341 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 PHEXP78562 749 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 DDX39BQ13838 428 aaKnown RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 CPSF6Q16630 551 aaKnown RBP eCLIP11.1□□□□□ -0.632e-9■□□□□ 10.6
RFC4-202ENST00000392481 AP5B1Q2VPB7 878 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 ABHD17BQ5VST6 288 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 H3F3CQ6NXT2 135 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 ZNF595Q8IYB9 648 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 CPAMD8Q8IZJ3 1885 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 CYP4X1Q8N118 509 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 ACOT4Q8N9L9 421 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 MZB1Q8WU39 189 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 UBLCP1Q8WVY7 318 aaPredicted RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 HAS2Q92819 552 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 ATP6V1E2Q96A05 226 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 RGMAQ96B86 450 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 MTERF1Q99551 399 aaKnown RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 CENPKQ9BS16 269 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 NTMT1Q9BV86 223 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 C1QTNF3Q9BXJ4 246 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 RNF32Q9H0A6 362 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 OR51B5Q9H339 312 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 NECTIN3Q9NQS3 549 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 PRTFDC1Q9NRG1 225 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 PSD3Q9NYI0 1048 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 KCMF1Q9P0J7 381 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 TMEM216Q9P0N5 145 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 RNF11Q9Y3C5 154 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 POLEQ07864 2286 aa11.1□□□□□ -0.63
RFC4-202ENST00000392481 USP9YO00507 2555 aaPredicted RBP11.1□□□□□ -0.63
RFC4-202ENST00000392481 HIVEP3Q5T1R4 2406 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms