RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 LRRTM2O43300 516 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LYRM1O43325 122 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PI15O43692 258 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PCDH7O60245 1069 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRMT3O60678 531 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 NOS1APO75052 506 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RFPL3O75679 317 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 OR7A10O76100 309 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 KLHL18O94889 574 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CCNB2O95067 398 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF682O95780 498 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LALBAP00709 142 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EBLN1P0CF75 366 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRPS2P11908 318 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 COL6A1P12109 1028 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 IFI30P13284 250 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HLA-EP13747 358 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ANXA8P13928 327 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ENGP17813 658 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ATF6P18850 670 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TNNI3P19429 210 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CD22P20273 847 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TNFRSF1BP20333 461 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZP3P21754 424 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PTX3P26022 381 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HMGB2P26583 209 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SLC6A1P30531 599 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 FGF9P31371 208 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 S100A3P33764 101 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CNR2P34972 360 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 THBS2P35442 1172 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SOX6P35712 828 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CD79BP40259 229 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PBX3P40426 434 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 IL12RB1P42701 662 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SLC6A12P48065 614 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SLC9A3P48764 834 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EVX1P49640 407 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 STK19P49842 368 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RENBPP51606 427 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 AFF1P51825 1210 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MAP2K6P52564 334 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EPHA5P54756 1037 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZP1P60852 638 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RPS25P62851 125 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RAE1P78406 368 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ALDH6A1Q02252 535 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF91Q05481 1191 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CACNB2Q08289 660 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 DSC1Q08554 894 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 RBBP4Q09028 425 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SMARCB1Q12824 385 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MAP4K2Q12851 820 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF155Q12901 538 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ABRQ12979 859 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HNRNPA0Q13151 305 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MAD2L1Q13257 205 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TPBGQ13641 420 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ELOAQ14241 798 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MBTPS1Q14703 1052 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PTPRRQ15256 657 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PCBP1Q15365 356 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SF3A2Q15428 464 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TAF1AQ15573 450 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 OCLNQ16625 522 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 DUOXA1Q1HG43 343 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 EXOC3L2Q2M3D2 409 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF792Q3KQV3 632 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LGALSLQ3ZCW2 172 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TIGD5Q53EQ6 642 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ARHGAP15Q53QZ3 475 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ZNF385BQ569K4 471 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MS4A13Q5J8X5 152 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 TJAP1Q5JTD0 557 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HABP4Q5JVS0 413 aaKnown RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SLC25A30Q5SVS4 291 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PDZK1Q5T2W1 519 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LCN1P1Q5VSP4 162 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MARC1Q5VT66 337 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 SPRYD7Q5W111 196 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ANKRD54Q6NXT1 300 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 CNIH2Q6PI25 160 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 DOK6Q6PKX4 331 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LIPIQ6XZB0 460 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 HSDL2Q6YN16 418 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MBOAT1Q6ZNC8 495 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 QSOX2Q6ZRP7 698 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 ARMCX2Q7L311 632 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRICKLE2Q7Z3G6 844 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRSS42Q7Z5A4 293 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 PRRT2Q7Z6L0 340 aaPredicted RBP3.3□□□□□ -1.88
TRAV39-201ENST00000390466 MRGPREQ86SM8 312 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 COMMD7Q86VX2 200 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 AMIGO1Q86WK6 493 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 NR2C2APQ86WQ0 139 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 KRT73Q86Y46 540 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 KIF18BQ86Y91 864 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 LURAP1LQ8IV03 231 aa3.3□□□□□ -1.88
TRAV39-201ENST00000390466 P3H2Q8IVL5 708 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms