RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 IGHV3-23P01764 117 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 CLEC3BP05452 202 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 OR9G9P0C7N8 305 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 LAMP1P11279 417 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 DUTP33316 252 aaKnown RBP0.04□□□□□ -2.4
SNORA40-201ENST00000388090 NUDT1P36639 197 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 NT5C2P49902 561 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 EVCP57679 992 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 TBCEQ15813 527 aaPredicted RBP0.04□□□□□ -2.4
SNORA40-201ENST00000388090 C14orf28Q4W4Y0 310 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 SLC22A10Q63ZE4 541 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 PRR27Q6MZM9 219 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 Q71RC1 249 aaPredicted RBP0.04□□□□□ -2.4
SNORA40-201ENST00000388090 HMGN2P46Q86SG4 172 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 TBC1D10CQ8IV04 446 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 ZNF595Q8IYB9 648 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 TEX26Q8N6G2 289 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 Q8N9G6 341 aaPredicted RBP0.04□□□□□ -2.4
SNORA40-201ENST00000388090 CCDC71LQ8N9Z2 235 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 RELL2Q8NC24 303 aaPredicted RBP0.04□□□□□ -2.4
SNORA40-201ENST00000388090 PGAM5Q96HS1 289 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 CCDC136Q96JN2 1154 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 NDNQ99608 321 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 C19orf24Q9BVV8 132 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 SLC2A11Q9BYW1 496 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 PRRG4Q9BZD6 226 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 SDCBP2Q9H190 292 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 SH2D4AQ9H788 454 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 EQTNQ9NQ60 294 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 IMPAD1Q9NX62 359 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 CACNG2Q9Y698 323 aa0.04□□□□□ -2.4
SNORA40-201ENST00000388090 FLG2Q5D862 2391 aaPredicted RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 ARPC4-TTLL3A0A0A6YYG9 625 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 EFCAB7A8K855 629 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 TCP10L2B9ZVM9 353 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 PHGR1C9JFL3 82 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 AP3D1O14617 1153 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 NUDT21O43809 227 aaKnown RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 WDHD1O75717 1129 aaPredicted RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 RBBP9O75884 186 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 PRAMEF12O95522 483 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 YES1P07947 543 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 TRIM21P19474 475 aaKnown RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 ZP3P21754 424 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 IL2RGP31785 369 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 TUBP50607 506 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 PRAMEP78395 509 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 CD47Q08722 323 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 SRSF5Q13243 272 aaKnown RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 RPS6KA1Q15418 735 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 NPTX1Q15818 432 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 FAM71E1Q6IPT2 247 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 NEPROQ6NW34 567 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 KLHL35Q6PF15 583 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 CYP26C1Q6V0L0 522 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 LINC00336Q6ZUF6 198 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 DET1Q7L5Y6 550 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 ANKRD18AQ8IVF6 992 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 RASGEF1AQ8N9B8 481 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 DCAF4L2Q8NA75 395 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 ZUFSPQ96AP4 578 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 CMTM3Q96MX0 182 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 FOPNLQ96NB1 174 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 COL21A1Q96P44 957 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 OPA3Q9H6K4 179 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 SAMHD1Q9Y3Z3 626 aaKnown RBP0.03□□□□□ -2.4
SNORA40-201ENST00000388090 RFNGQ9Y644 331 aa0.03□□□□□ -2.4
SNORA40-201ENST00000388090 ANHXE9PGG2 379 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP0.02□□□□□ -2.41
SNORA40-201ENST00000388090 PAPSS1O43252 624 aaPredicted RBP0.02□□□□□ -2.41
SNORA40-201ENST00000388090 ATP6AP2O75787 350 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 RB1P06400 928 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 SBK2P0C263 348 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 P4HA1P13674 534 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 RPS8P62241 208 aaKnown RBP0.02□□□□□ -2.41
SNORA40-201ENST00000388090 RALGDSQ12967 914 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 CUL3Q13618 768 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 NONOQ15233 471 aaKnown RBP eCLIP0.02□□□□□ -2.41
SNORA40-201ENST00000388090 CNPY1Q3B7I2 92 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 SBK1Q52WX2 424 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 TOR1AIP1Q5JTV8 583 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 TATDN1Q6P1N9 297 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 LINC01551Q86U37 167 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 ZNF695Q8IW36 515 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 CCDC146Q8IYE0 955 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 LIPHQ8WWY8 451 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 NRTNQ99748 197 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 ACTL8Q9H568 366 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 NMUR1Q9HB89 426 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 MIEF1Q9NQG6 463 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 GSN-AS1Q9NRJ2 163 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 ABCC13Q9NSE7 274 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 SPG21Q9NZD8 308 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 DGKBQ9Y6T7 804 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 RLFQ13129 1914 aa0.02□□□□□ -2.41
SNORA40-201ENST00000388090 PRRC2BQ5JSZ5 2229 aaKnown RBP0.01□□□□□ -2.41
SNORA40-201ENST00000388090 COLCA2A8K830 154 aa0.01□□□□□ -2.41
SNORA40-201ENST00000388090 PLIN1O60240 522 aa0.01□□□□□ -2.41
SNORA40-201ENST00000388090 CD4P01730 458 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms