RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 DCAF4L2Q8NA75 395 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 C1orf64Q8NEQ6 169 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 OR6J1Q8NGC5 347 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 GOT1L1Q8NHS2 421 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRCCQ92733 491 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 DLX4Q92988 240 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 RBM17Q96I25 401 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 VSIG2Q96IQ7 327 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 RSRC1Q96IZ7 334 aaKnown RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SGK494Q96LW2 274 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 RAB40CQ96S21 281 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PITX2Q99697 317 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 SARGQ9BW04 601 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 STRADBQ9C0K7 418 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 CCDC8Q9H0W5 538 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 Q9N2K0 584 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PNPLA8Q9NP80 782 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 RGL1Q9NZL6 768 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRO2289Q9P1D8 64 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 CTNNAL1Q9UBT7 734 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LEF1Q9UJU2 399 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 FOXJ3Q9UPW0 622 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 COMMD3-BMI1R4GMX3 469 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 LOC285556D6RIA3 1793 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 PLA2R1Q13018 1463 aa-1.19□□□□□ -2.6
RNU6-540P-201ENST00000384622 KNDC1Q76NI1 1749 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF879B4DU55 563 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPL36A-HNRNPH2H7BZ11 118 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 VCYO14598 125 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 BET1O15155 118 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ANGPTL7O43827 346 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 CPSF4O95639 269 aaKnown RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 EDN2P20800 178 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 PDIA3P30101 505 aaKnown RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACTA2P62736 377 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACTC1P68032 377 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 OC90Q02509 493 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 MERTKQ12866 999 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 DCTN1Q14203 1278 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 HERC3Q15034 1050 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 TAF7LQ5H9L4 462 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 DCST2Q5T1A1 773 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ANKRD22Q5VYY1 191 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 NCR3LG1Q68D85 454 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ARSKQ6UWY0 536 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 PQLC2Q6ZP29 291 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 TMEM26Q6ZUK4 368 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 LCA10Q71F78 164 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRSS41Q7RTY9 318 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 PCGF5Q86SE9 256 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 CARM1Q86X55 608 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF677Q86XU0 584 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 KCTD6Q8NC69 237 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 OR5L2Q8NGL0 311 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 OR5M8Q8NGP6 311 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 OR13C3Q8NGS6 347 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 PAQR8Q8TEZ7 354 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 WFIKKN1Q96NZ8 548 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 BBS4Q96RK4 519 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 FEVQ99581 238 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 CTDSP1Q9GZU7 261 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 SEMA6AQ9H2E6 1030 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 TTC12Q9H892 705 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 SPACA1Q9HBV2 294 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 MBNL1Q9NR56 388 aaKnown RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 P4HTMQ9NXG6 502 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 COL4A6Q14031 1691 aa-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 GPATCH8Q9UKJ3 1502 aaKnown RBP-1.2□□□□□ -2.6
RNU6-540P-201ENST00000384622 METP08581 1390 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 A0A1W2PPE3 182 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM25EA8MYX2 175 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 B4DSR2 109 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 E9PI62 339 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 K7EQG2 157 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 M0QZ24 198 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 HAS3O00219 553 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZNF749O43361 778 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 TLX2O43763 284 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 NEBLO76041 1014 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 CFDP00746 253 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 HSP90AA1P07900 732 aaKnown RBP-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 SELEP16581 610 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 GLRA1P23415 457 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 TGFBR2P37173 567 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 PBX3P40426 434 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 BTG1P62324 171 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACTA1P68133 377 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 BAMBIQ13145 260 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 HEPACAMQ14CZ8 416 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 VEPH1Q14D04 833 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 KYAT1Q16773 422 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 HES3Q5TGS1 186 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 SHEQ5VZ18 495 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 CPLX2Q6PUV4 134 aaKnown RBP-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 SYNE3Q6ZMZ3 975 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 DNM1P46Q6ZS02 220 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 BEND5Q7L4P6 421 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 DET1Q7L5Y6 550 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 ZBTB46Q86UZ6 589 aa-1.21□□□□□ -2.6
RNU6-540P-201ENST00000384622 GPR137CQ8N3F9 429 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms