RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 AP3M1Q9Y2T2 418 aa23.33■■□□□ 1.32
ECHDC3-201ENST00000379215 A0A096LPI6 279 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 PRSS51A0A1B0GVH4 220 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 RNASET2O00584 256 aaKnown RBP23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 CPNE6O95741 557 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 PIM1P11309 404 aaPredicted RBP23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 BTN3A2P78410 334 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 OR4F3Q6IEY1 312 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 PGM2L1Q6PCE3 622 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 ZNF285Q96NJ3 590 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 IL1RL2Q9HB29 575 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 ADA2Q9NZK5 511 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 ABCD2Q9UBJ2 740 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 KLHL3Q9UH77 587 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 PHF11Q9UIL8 331 aa23.32■■□□□ 1.32
ECHDC3-201ENST00000379215 CABIN1Q9Y6J0 2220 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 A0A0G2JN53 185 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 LNP1A1A4G5 178 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 B3GALT2O43825 422 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 LAMP1P11279 417 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 LRIF1Q5T3J3 769 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 GARNL3Q5VVW2 1013 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 TCEAL6Q6IPX3 200 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 DLEU7Q6UYE1 221 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 DBX2Q6ZNG2 339 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 ZCCHC10Q8TBK6 192 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 TCEAL3Q969E4 200 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 CGREF1Q99674 301 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 MS4A12Q9NXJ0 267 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 TMEM181Q9P2C4 612 aa23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 EXO1Q9UQ84 846 aaKnown RBP23.31■■□□□ 1.32
ECHDC3-201ENST00000379215 C4orf51C9J302 202 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 RFXANKO14593 260 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ZNF806P0C7X5 589 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 MSL3P1P0C860 447 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 CERS1P27544 350 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 PHC1P78364 1004 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 CFHR1Q03591 330 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC14A1Q13336 389 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 PRTGQ2VWP7 1150 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 PIGGQ5H8A4 983 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 WASHC2DQ5SRD0 308 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 PERM1Q5SV97 790 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 USP53Q70EK8 1073 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 FAM13CQ8NE31 585 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 OR8J3Q8NGG0 315 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 IFI44Q8TCB0 444 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 NUDT8Q8WV74 236 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC41A2Q96JW4 573 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 CCDC115Q96NT0 180 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 LRRN3Q9H3W5 708 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ZNF768Q9H5H4 540 aaKnown RBP23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 PRDM9Q9NQV7 894 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ENAMQ9NRM1 1142 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 L3MBTL1Q9Y468 752 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ASB4Q9Y574 426 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SPACA6W5XKT8 324 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SH3BP5O60239 455 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 DNAJA2O60884 412 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 RPLP0P05388 317 aaKnown RBP23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ANKRD34CP0C6C1 535 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC6A2P23975 617 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 GABRA4P48169 554 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC7A2P52569 658 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 EMP3P54852 163 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 WNT3P56703 355 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 DEFB110Q30KQ9 67 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 NDUFAF5Q5TEU4 345 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 RIPOR1Q6ZS17 1223 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 NET1Q7Z628 596 aaPredicted RBP23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 TICAM1Q8IUC6 712 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 D2HGDHQ8N465 521 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 OR4D9Q8NGE8 314 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 KLHL6Q8WZ60 621 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 GBP5Q96PP8 586 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 NPLQ9BXD5 320 aaPredicted RBP23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SERHLQ9NQF3 203 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 TAS2R7Q9NYW3 318 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC7A8Q9UHI5 535 aa23.3■■□□□ 1.32
ECHDC3-201ENST00000379215 ADAMTS9Q9P2N4 1935 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 MDC1Q14676 2089 aaKnown RBP23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 C1orf226A1L170 272 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 SCN2BO60939 215 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 ANP32DO95626 131 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 ME2P23368 584 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 BUD31P41223 144 aaPredicted RBP23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 MC1RQ01726 317 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 DEFB134Q4QY38 66 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 CLPTM1LQ96KA5 538 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 PANX1Q96RD7 426 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 SLC39A3Q9BRY0 314 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 IRF2BPLQ9H1B7 796 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 ANKHQ9HCJ1 492 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 LYRM4Q9HD34 91 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 PCDHGB4Q9UN71 923 aa23.29■■□□□ 1.32
ECHDC3-201ENST00000379215 ALDH9A1P49189 494 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 ELF3P78545 371 aaPredicted RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 CAPRIN1Q14444 709 aaKnown RBP23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 ANKRD26P1Q6NSI1 321 aa23.28■■□□□ 1.32
ECHDC3-201ENST00000379215 AMER3Q8N944 861 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms