RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SEC16AO15027 2179 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 RTCAO00442 366 aaKnown RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 IGHEP01854 428 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 CYC1P08574 325 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 MMP11P24347 488 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 GRK2P25098 689 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 BSGP35613 385 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 HTR6P50406 440 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 RAP1GDS1P52306 607 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 CSTF3Q12996 717 aaKnown RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 ABRAXAS2Q15018 415 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 COL28A1Q2UY09 1125 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 RNF165Q6ZSG1 346 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 SHISA6Q6ZSJ9 500 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 ZCCHC7Q8N3Z6 543 aaKnown RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 PPP1R14CQ8TAE6 165 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 THAP4Q8WY91 577 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 TBC1D20Q96BZ9 403 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 CRELD1Q96HD1 420 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 PAIP2Q9BPZ3 127 aaKnown RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 DDX31Q9H8H2 851 aaKnown RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 COPS7BQ9H9Q2 264 aaPredicted RBP17.69■□□□□ 0.42
SSU72-203ENST00000378725 LYRM4Q9HD34 91 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 LANCL2Q9NS86 450 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 NMRK1Q9NWW6 199 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 AHSPQ9NZD4 102 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 DAPP1Q9UN19 280 aa17.69■□□□□ 0.42
SSU72-203ENST00000378725 TPRP12270 2363 aaKnown RBP17.68■□□□□ 0.42
SSU72-203ENST00000378725 ZFHX4Q86UP3 3567 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CDC14CA4D256 554 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 TMEM114B3SHH9 223 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 AZIN1O14977 448 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 ATP8B1O43520 1251 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 JRKO75564 520 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CRCPO75575 148 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 FHP07954 510 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 PRKAR1AP10644 381 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 RNH1P13489 461 aaKnown RBP17.68■□□□□ 0.42
SSU72-203ENST00000378725 BGNP21810 368 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CERS1P27544 350 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 SERPINB3P29508 390 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 SSR2P43308 183 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 EMP2P54851 167 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 LIM2P55344 173 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 TBL3Q12788 808 aaKnown RBP17.68■□□□□ 0.42
SSU72-203ENST00000378725 UGT3A2Q3SY77 523 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 TUBB8Q3ZCM7 444 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 ATP1A1-AS1Q5TC04 95 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 KANK2Q63ZY3 851 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 TRIM46Q7Z4K8 759 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 PRSS58Q8IYP2 241 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 METTL4Q8N3J2 472 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 MGARPQ8TDB4 240 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CATSPER2Q96P56 530 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 IP6K3Q96PC2 410 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CRB3Q9BUF7 120 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 SORBS1Q9BX66 1292 aaKnown RBP17.68■□□□□ 0.42
SSU72-203ENST00000378725 ACPTQ9BZG2 426 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 VPS29Q9UBQ0 182 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 C3orf18Q9UK00 162 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 ADAM29Q9UKF5 820 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 SLC12A4Q9UP95 1085 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 TRAF6Q9Y4K3 522 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 CELSR3Q9NYQ7 3312 aa17.68■□□□□ 0.42
SSU72-203ENST00000378725 A0A0A6YYD5 115 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 IDSB3KWA1 339 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 PCDH17O14917 1159 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 ITM2AO43736 263 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 SNUPNO95149 360 aaKnown RBP17.67■□□□□ 0.42
SSU72-203ENST00000378725 HEXBP07686 556 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 CHN1P15882 459 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 EFNA3P52797 238 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 RAB38P57729 211 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 ABCE1P61221 599 aaKnown RBP17.67■□□□□ 0.42
SSU72-203ENST00000378725 STX3Q13277 289 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 CLEC6AQ6EIG7 209 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 MRM1Q6IN84 353 aaKnown RBP17.67■□□□□ 0.42
SSU72-203ENST00000378725 GPR155Q7Z3F1 870 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 PPP1R32Q7Z5V6 425 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 RAB43Q86YS6 212 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 PLPP5Q8NEB5 264 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 ADAMTS18Q8TE60 1221 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 CHTF18Q8WVB6 975 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 HBEGFQ99075 208 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 MRPL1Q9BYD6 325 aaKnown RBP17.67■□□□□ 0.42
SSU72-203ENST00000378725 C20orf27Q9GZN8 174 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 VN1R1Q9GZP7 353 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 ZDHHC2Q9UIJ5 367 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 MKL2Q9ULH7 1088 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 DNAJC15Q9Y5T4 150 aa17.67■□□□□ 0.42
SSU72-203ENST00000378725 FAM227AF5H4B4 570 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 CYR61O00622 381 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 EEDO75530 441 aaKnown RBP17.66■□□□□ 0.42
SSU72-203ENST00000378725 NEFHP12036 1026 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 JAK1P23458 1154 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 OTX2P32243 289 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 SLC1A6P48664 564 aa17.66■□□□□ 0.42
SSU72-203ENST00000378725 RHAGQ02094 409 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms