RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TBL1YQ9BQ87 522 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 POLR1EQ9GZS1 481 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MGAT4CQ9UBM8 478 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 NENFQ9UMX5 172 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SLC12A8A0AV02 714 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 LRIT2A6NDA9 550 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 GRIN3BO60391 1043 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SLC22A3O75751 556 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 H2AFB2P0C5Z0 115 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MAT2AP31153 395 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RENBPP51606 427 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 NUBP1P53384 320 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CRTC2Q53ET0 693 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 ARHGAP15Q53QZ3 475 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SAPCD1Q5SSQ6 148 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CASP12Q6UXS9 341 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RANBP10Q6VN20 620 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MAVSQ7Z434 540 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RDH10Q8IZV5 341 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 GHDCQ8N2G8 530 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 BEST4Q8NFU0 473 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 OR4A15Q8NGL6 344 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RBM18Q96H35 190 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TPD52L3Q96J77 140 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 HERPUD2Q9BSE4 406 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FUZQ9BT04 418 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TRMOQ9BU70 441 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 ELOVL4Q9GZR5 314 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF385DQ9H6B1 395 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 DNMT3BQ9UBC3 853 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 URADA6NGE7 173 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TMEM233B4DJY2 109 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SDHDO14521 159 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 B3GAT3O94766 335 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SPDEFO95238 335 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 PIGRP01833 764 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 LTFP02788 710 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TGFBR1P36897 503 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FEN1P39748 380 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RBP2P50120 134 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 LARS2Q15031 903 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 PTCHD4Q6ZW05 846 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 LIX1Q8N485 282 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MINDY1Q8N5J2 469 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TNFAIP8L1Q8WVP5 186 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 EDEM1Q92611 657 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 NELL1Q92832 810 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CCNL2Q96S94 520 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FAM124BQ9H5Z6 455 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 C2CD4BA6NLJ0 364 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RPS2P15880 293 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CCR1P32246 355 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MMP12P39900 470 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FABP9Q0Z7S8 132 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 ZNHIT3Q15649 155 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MICAQ29983 383 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 LBHQ53QV2 105 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 MARC1Q5VT66 337 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TXNRD3NBQ6F5E7 133 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 SLC35F3Q8IY50 421 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CARFQ8N187 725 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RHBDF1Q96CC6 855 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 CNTNAP3BQ96NU0 1288 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TSGA13Q96PP4 275 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 FIZ1Q96SL8 496 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 RHOJQ9H4E5 214 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TFB2MQ9H5Q4 396 aaKnown RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 AKAP7Q9P0M2 348 aaPredicted RBP11.35□□□□□ -0.59
NPHP4-202ENST00000378161 GHRLQ9UBU3 117 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 TRAPPC4Q9Y296 219 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 PKP3Q9Y446 797 aa11.35□□□□□ -0.59
NPHP4-202ENST00000378161 PCM1Q15154 2024 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 A0A087X0M5 115 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 A0A1B0GX30 115 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ELOVL7A1L3X0 281 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ADAMDEC1O15204 470 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ARPC5O15511 151 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 TFP02787 698 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 FBP1P09467 338 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SELLP14151 372 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 GCGRP47871 477 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 RAB10P61026 200 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ZNF691Q5VV52 312 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 FUT10Q6P4F1 479 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SLC22A15Q8IZD6 547 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 C1orf127Q8N9H9 656 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OR10K1Q8NGX5 313 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 FCRL1Q96LA6 429 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PIGQQ9BRB3 760 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 VPS25Q9BRG1 176 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 ULBP1Q9BZM6 244 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 SLC38A1Q9H2H9 487 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 NT5MQ9NPB1 228 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 PCDHB14Q9Y5E9 798 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 RNF215Q9Y6U7 377 aa11.34□□□□□ -0.59
NPHP4-202ENST00000378161 OR2AT4A6NND4 320 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms