RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MAP7D3Q8IWC1 876 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SYCE1Q8N0S2 351 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 HDDC3Q8N4P3 179 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DCLK2Q8N568 766 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 AADATQ8N5Z0 425 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 PCDH20Q8N6Y1 951 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 SUMF1Q8NBK3 374 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 OR2AP1Q8NGE2 309 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 OR2A12Q8NGT7 310 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 EXD1Q8NHP7 514 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RBM41Q96IZ5 413 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 CCDC114Q96M63 670 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 GDAP1L1Q96MZ0 367 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 OMDQ99983 421 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 GPR174Q9BXC1 333 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 HEMGNQ9BXL5 484 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 MAK16Q9BXY0 300 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 TSGA10Q9BZW7 698 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RETREG1Q9H6L5 497 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 TRMT1Q9NXH9 659 aaKnown RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 FBXL12Q9NXK8 326 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DONSONQ9NYP3 566 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 IFT80Q9P2H3 777 aaPredicted RBP4.3□□□□□ -1.72
PMS1-202ENST00000374826 IL36AQ9UHA7 158 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 RAB23Q9ULC3 237 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 PYCARDQ9ULZ3 195 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.3□□□□□ -1.72
PMS1-202ENST00000374826 TTLL3Q9Y4R7 772 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 DNAH14Q0VDD8 3507 aa4.3□□□□□ -1.72
PMS1-202ENST00000374826 SCN2AQ99250 2005 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 COL27A1Q8IZC6 1860 aaPredicted RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 SRRM3A6NNA2 597 aaPredicted RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 USP27XA6NNY8 438 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 MIF4GDA9UHW6 222 aaKnown RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 KCNK1O00180 336 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TIMM23O14925 209 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ALOX15BO15296 676 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ZNF217O75362 1048 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NEBLO76041 1014 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SEMA4FO95754 770 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 IGLV3-19P01714 112 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 HLA-DQB2P05538 268 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 DAOP14920 347 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CENPAP49450 140 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 PEX5P50542 639 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 RWDD2BP57060 319 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SEMG2Q02383 582 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CREB5Q02930 508 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SLC20A2Q08357 652 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 AP1B1Q10567 949 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ZBTB17Q13105 803 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TFDP2Q14188 446 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TAZQ16635 292 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TFDP3Q5H9I0 405 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 PIP5KL1Q5T9C9 394 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SEL1L2Q5TEA6 688 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 FAM46CQ5VWP2 391 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 LYSMD4Q5XG99 296 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TCEAL6Q6IPX3 200 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NCEH1Q6PIU2 408 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SLC36A4Q6YBV0 504 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 BBS12Q6ZW61 710 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 DENND6AQ8IWF6 608 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CCDC13Q8IYE1 715 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 RCOR2Q8IZ40 523 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 PGBD5Q8N414 524 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ZCCHC9Q8N567 271 aaKnown RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 UBL4BQ8N7F7 174 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 PAF1Q8N7H5 531 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CCNYQ8ND76 341 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CCT6BQ92526 530 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 KLK6Q92876 244 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 TCEAL3Q969E4 200 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ISG20Q96AZ6 181 aaKnown RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 HDAC11Q96DB2 347 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ADGRG7Q96K78 797 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NSMCE3Q96MG7 304 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 OLFM3Q96PB7 478 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ALS2CR12Q96Q35 445 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 LGMNQ99538 433 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 OSBPL8Q9BZF1 889 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NEUROG2Q9H2A3 272 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ARRDC1-AS1Q9H2J1 176 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 C10orf88Q9H8K7 445 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NT5MQ9NPB1 228 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ITM2CQ9NQX7 267 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 DYRK4Q9NR20 520 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 WSB2Q9NYS7 404 aaPredicted RBP4.29□□□□□ -1.72
PMS1-202ENST00000374826 SEPT10Q9P0V9 454 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 GMEB2Q9UKD1 530 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 ITM2BQ9Y287 266 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 NCKAP1Q9Y2A7 1128 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 SLCO1B1Q9Y6L6 691 aa4.29□□□□□ -1.72
PMS1-202ENST00000374826 CXorf51AA0A1B0GTR3 108 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 H7C0C1 242 aa4.28□□□□□ -1.72
PMS1-202ENST00000374826 APOC4-APOC2K7ER74 178 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms