RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 S100A12P80511 92 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SHC2P98077 582 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 MMEL1Q495T6 779 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TRIM40Q6P9F5 258 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TMIGD1Q6UXZ0 262 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PDZD3Q86UT5 571 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 C10orf107Q8IVU9 208 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 NKAIN3Q8N8D7 197 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ENDOVQ8N8Q3 282 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 OR52B6Q8NGF0 335 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 FGF11Q92914 225 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SLC22A18Q96BI1 424 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 LRRC39Q96DD0 335 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SLC45A3Q96JT2 553 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 SDHAF3Q9NRP4 125 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TAS2R7Q9NYW3 318 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 MBD2Q9UBB5 411 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PCDHGA11Q9Y5H2 935 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 CLCA3PQ9Y6N3 262 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.333e-6■■■■□ 20.7
USP1-202ENST00000371146 ZNF407Q9C0G0 2248 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 MED13Q9UHV7 2174 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TNFRSF10CO14798 259 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 CNOT3O75175 753 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 PRB1P04280 392 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ZNF37AP17032 561 aaPredicted RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 CCNA2P20248 432 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 XCR1P46094 333 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 RXRGP48443 463 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 LIMK2P53671 638 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 KIAA1024LP59773 190 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 RPL38P63173 70 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 PPP2R2BQ00005 443 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ENPP2Q13822 863 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ABRAXAS2Q15018 415 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 OR4D1Q15615 310 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 TMEM95Q3KNT9 176 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 FRMPD2BQ6IN97 320 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 EMBQ6PCB8 327 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ARFGAP2Q8N6H7 521 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 FNDC5Q8NAU1 212 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 OR10Z1Q8NGY1 313 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 PNPT1Q8TCS8 783 aaKnown RBP6.72□□□□□ -1.33
USP1-202ENST00000371146 EME1Q96AY2 570 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ASPSCR1Q9BZE9 553 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ACSS3Q9H6R3 686 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 ANKMY1Q9P2S6 941 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 OR10H1Q9Y4A9 318 aa6.72□□□□□ -1.33
USP1-202ENST00000371146 NINQ8N4C6 2090 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 NOBOXO60393 691 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 C1orf105O95561 183 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 ENO3P13929 434 aaPredicted RBP6.71□□□□□ -1.33
USP1-202ENST00000371146 SDHBP21912 280 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 CPN2P22792 545 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 RYKP34925 604 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 KRT20P35900 424 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 HSD11B2P80365 405 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 INSM1Q01101 510 aaPredicted RBP6.71□□□□□ -1.33
USP1-202ENST00000371146 TAGLNQ01995 201 aaKnown RBP6.71□□□□□ -1.33
USP1-202ENST00000371146 STX3Q13277 289 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 TAZQ16635 292 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 MAPKAPK3Q16644 382 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 CYP1B1Q16678 543 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 TYSND1Q2T9J0 566 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 Q3ZCU0 254 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 CCNYL2Q5T2Q4 361 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 LRRC8EQ6NSJ5 796 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 C3P1Q6ZMU1 363 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 TRPM8Q7Z2W7 1104 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 TMPRSS9Q7Z410 1059 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 ANKRD46Q86W74 232 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 AFAP1L2Q8N4X5 818 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 FAM13CQ8NE31 585 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 TTLQ8NG68 377 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 KCNJ9Q92806 393 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 ZNF490Q9ULM2 529 aaPredicted RBP6.71□□□□□ -1.33
USP1-202ENST00000371146 PCDHGB4Q9UN71 923 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 V9GYQ6 96 aa6.71□□□□□ -1.33
USP1-202ENST00000371146 CCDC187A0A096LP49 1063 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 OR5K3A6NET4 321 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 MEN1O00255 615 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 SPAG6O75602 509 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 OPN1LWP04000 364 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 GSNP06396 782 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 CBSLP0DN79 551 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 HPGDP15428 266 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 EPORP19235 508 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 PTNP21246 168 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 AOAHP28039 575 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 CBSP35520 551 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 CCR8P51685 355 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 GPR85P60893 370 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 RPS13P62277 151 aaKnown RBP6.71□□□□□ -1.34
USP1-202ENST00000371146 ACY1Q03154 408 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 DPTQ07507 201 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 TP53BP2Q13625 1128 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 CAPRIN1Q14444 709 aaKnown RBP6.71□□□□□ -1.34
USP1-202ENST00000371146 PDK4Q16654 411 aa6.71□□□□□ -1.34
USP1-202ENST00000371146 FAM214AQ32MH5 1076 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms