RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SPOCK3Q9BQ16 436 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 CAPS2Q9BXY5 557 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 PITHD1Q9GZP4 211 aaPredicted RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 RHOJQ9H4E5 214 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 PRTFDC1Q9NRG1 225 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 GPRC5BQ9NZH0 403 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 FBXW2Q9UKT8 454 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 TEP1Q99973 2627 aaKnown RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 DCHS2Q6V1P9 2916 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 A0A0G2JN53 185 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 A0A1B0GTH9 108 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 CLDN4O14493 209 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 TFECO14948 347 aaPredicted RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 TAPBPO15533 448 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ERI3O43414 337 aaKnown RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 TFEBP19484 476 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 PPP2R1BP30154 601 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 SSTR2P30874 369 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 PTGS2P35354 604 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ILF2Q12905 390 aaKnown RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 TGFBIQ15582 683 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 CMPK2Q5EBM0 449 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 C3P1Q6ZMU1 363 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 FRA10AC1Q70Z53 315 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 MDGA2Q7Z553 956 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 VN1R5Q7Z5H4 357 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ZNF595Q8IYB9 648 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 CYP4Z2PQ8N1L4 340 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 KRT78Q8N1N4 520 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 TMEM156Q8N614 296 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ZFP62Q8NB50 900 aaPredicted RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 OR2L5Q8NG80 312 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 FAM57AQ8TBR7 257 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 NCLNQ969V3 563 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 VPS39Q96JC1 886 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 CAPZA3Q96KX2 299 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 DERL2Q9GZP9 239 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ENKD1Q9H0I2 346 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 EHD1Q9H4M9 534 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 PNO1Q9NRX1 252 aaKnown RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 NSMCE4AQ9NXX6 385 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 ZNF490Q9ULM2 529 aaPredicted RBP14.92□□□□□ -0.02
CKS1B-202ENST00000368436 HRH3Q9Y5N1 445 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 HCFC1P51610 2035 aa14.92□□□□□ -0.02
CKS1B-202ENST00000368436 EML6Q6ZMW3 1958 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 A0A088AWK7 358 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 SYNDIG1LA6NDD5 238 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 TMEM200CA6NKL6 621 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 CYR61O00622 381 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 B3GALT2O43825 422 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 HS6ST1O60243 411 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 PRKNO60260 465 aaPredicted RBP14.91□□□□□ -0.02
CKS1B-202ENST00000368436 PRAMEF4O60810 478 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 ZFAND5O76080 213 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 ZNF10P21506 573 aaPredicted RBP14.91□□□□□ -0.02
CKS1B-202ENST00000368436 RFC3P40938 356 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 SLC13A2Q13183 592 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 CDKL4Q5MAI5 379 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 PRAMEF9Q5VWM5 478 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 TCAIMQ8N3R3 496 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 WDR34Q96EX3 536 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 C14orf79Q96F83 325 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 SERINC2Q96SA4 455 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 TREX2Q9BQ50 279 aaPredicted RBP14.91□□□□□ -0.02
CKS1B-202ENST00000368436 CCDC77Q9BR77 488 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 TMEM79Q9BSE2 394 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 ADAP2Q9NPF8 381 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 TIMMDC1Q9NPL8 285 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 SMYD2Q9NRG4 433 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 PLSCR2Q9NRY7 297 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 PPT2Q9UMR5 302 aa14.91□□□□□ -0.02
CKS1B-202ENST00000368436 MRPS33Q9Y291 106 aaKnown RBP14.91□□□□□ -0.02
CKS1B-202ENST00000368436 YARS2Q9Y2Z4 477 aaKnown RBP14.91□□□□□ -0.02
CKS1B-202ENST00000368436 ANKDD1BA6NHY2 528 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 NCF1BA6NI72 391 aaPredicted RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 NCF1CA8MVU1 366 aaPredicted RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 CCDC188H7C350 402 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 CTNSO60931 367 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 NCF1P14598 390 aaPredicted RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 HPDP32754 393 aaPredicted RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 SSR4P51571 173 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 PLA2G16P53816 162 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 LIM2P55344 173 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 POU4F1Q01851 419 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 ELAVL1Q15717 326 aaKnown RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 TRIM40Q6P9F5 258 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 ABHD17CQ6PCB6 329 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 GPALPP1Q8IXQ4 340 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 TMEM132CQ8N3T6 1108 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 FAM47BQ8NA70 645 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 CA5BP1Q8WTZ4 195 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 CCT6BQ92526 530 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 SDCCAG3Q96C92 435 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 TRIM31Q9BZY9 425 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 REXO4Q9GZR2 422 aaKnown RBP14.9□□□□□ -0.02
CKS1B-202ENST00000368436 KCNF1Q9H3M0 494 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 PRDM7Q9NQW5 492 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 DNAJC11Q9NVH1 559 aa14.9□□□□□ -0.02
CKS1B-202ENST00000368436 COQ3Q9NZJ6 369 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms