RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 E9PQ18 207 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 DUSP11O75319 330 aaKnown RBP9.71□□□□□ -0.86
PTPRA-203ENST00000356147 C1SP09871 688 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 TNNI3P19429 210 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 IDSP22304 550 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 LHCGRP22888 699 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 MYL9P24844 172 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 PBLDP30039 288 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-203ENST00000356147 DDOSTP39656 456 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 NSG1P42857 185 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
PTPRA-203ENST00000356147 KIR2DL3P43628 341 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 RUNX1T1Q06455 604 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 GPR17Q13304 367 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 TAF12Q16514 161 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 SLC5A12Q1EHB4 618 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 POM121L1PQ3SYA9 428 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 GPAT3Q53EU6 434 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 ARMCX6Q7L4S7 300 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 LRRC70Q7Z2Q7 622 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 GPR155Q7Z3F1 870 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 TCEANCQ8N8B7 351 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 OR8J2Q8NGG1 315 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 ASB11Q8WXH4 323 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 WFDC6Q9BQY6 131 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 CCDC32Q9BV29 185 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 SORBS1Q9BX66 1292 aaKnown RBP9.71□□□□□ -0.86
PTPRA-203ENST00000356147 RDH14Q9HBH5 336 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 COQ3Q9NZJ6 369 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 EXO1Q9UQ84 846 aaKnown RBP9.71□□□□□ -0.86
PTPRA-203ENST00000356147 SNX11Q9Y5W9 270 aa9.71□□□□□ -0.86
PTPRA-203ENST00000356147 EIF3FO00303 357 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 PLK4O00444 970 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TGFB1P01137 390 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CSF3P09919 207 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TSPAN19P0C672 248 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 JUPP14923 745 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 APEX1P27695 318 aaKnown RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CTGFP29279 349 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CHI3L1P36222 383 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 BDKRB1P46663 353 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 SLC6A12P48065 614 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 SLC11A1P49279 550 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 RORCP51449 518 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 MVDP53602 400 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 SPHARQ15513 63 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 C5orf22Q49AR2 442 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 PDZK1Q5T2W1 519 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 FRMPD2BQ6IN97 320 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 C2orf73Q8N5S3 287 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 SNAPC3Q92966 411 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 OTUB1Q96FW1 271 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 RNF170Q96K19 258 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 HHIPQ96QV1 700 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 SLC12A9Q9BXP2 914 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 MIXL1Q9H2W2 232 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 OR51B5Q9H339 312 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TMPRSS11EQ9UL52 423 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 MN1Q10571 1320 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 ZSCAN5BA6NJL1 495 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CENPBD1B2RD01 187 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 B4DXG7 233 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 ALX3O95076 343 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 PSMA1P25786 263 aaKnown RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 GPC1P35052 558 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CRYBB2P43320 205 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CRISP1P54107 249 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 PSPHP78330 225 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 OR2G6Q5TZ20 316 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 FUT10Q6P4F1 479 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TNFAIP8L2Q6P589 184 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 THOC6Q86W42 341 aaKnown RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 YIPF7Q8N8F6 280 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 ZNF557Q8N988 423 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 L3MBTL4Q8NA19 623 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 VPS37AQ8NEZ2 397 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 NLGN4YQ8NFZ3 816 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 HUS1BQ8NHY5 278 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 BCL7CQ8WUZ0 217 aaPredicted RBP9.7□□□□□ -0.86
PTPRA-203ENST00000356147 RAB8BQ92930 207 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 CRELD1Q96HD1 420 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TM9SF2Q99805 663 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 HCN4Q9Y3Q4 1203 aa9.7□□□□□ -0.86
PTPRA-203ENST00000356147 TRBV5-4A0A0C4DH59 114 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 HMX3A6NHT5 357 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PSKH1P11801 424 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ITGA2P17301 1181 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SDC2P34741 201 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 PCGF2P35227 344 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 OPRD1P41143 372 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 ETV6P41212 452 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 MAN2A2P49641 1150 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 GNG2P59768 71 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 CDK6Q00534 326 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 SEC23BQ15437 767 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 CDKN3Q16667 212 aa9.69□□□□□ -0.86
PTPRA-203ENST00000356147 TIMM50Q3ZCQ8 353 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms