RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 GABRR2P28476 465 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 CBSP35520 551 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 ETV3P41162 512 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 PTPN5P54829 565 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 PTSQ03393 145 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 SLC5A12Q1EHB4 618 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 USP30Q70CQ3 517 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 MMP21Q8N119 569 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 CHST14Q8NCH0 376 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 MTERF3Q96E29 417 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 SCLYQ96I15 445 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 FYTTD1Q96QD9 318 aaKnown RBP12.8□□□□□ -0.36
NCDN-201ENST00000356090 KLF16Q9BXK1 252 aaPredicted RBP12.8□□□□□ -0.36
NCDN-201ENST00000356090 NMNAT1Q9HAN9 279 aaPredicted RBP12.8□□□□□ -0.36
NCDN-201ENST00000356090 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 COMMD3Q9UBI1 195 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 CKAP5Q14008 2032 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 CHD5Q8TDI0 1954 aa12.8□□□□□ -0.36
NCDN-201ENST00000356090 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 CHMP24386 653 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CRYBA2P53672 197 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 HNRNPA0Q13151 305 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 SLBPQ14493 270 aaKnown RBP eCLIP12.79□□□□□ -0.36
NCDN-201ENST00000356090 C5orf22Q49AR2 442 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 C22orf42Q6IC83 251 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TRMT11Q7Z4G4 463 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 TRIM69Q86WT6 500 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 KIAA1958Q8N8K9 716 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 ZFP41Q8N8Y5 198 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 L3MBTL4Q8NA19 623 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 C7orf57Q8NEG2 295 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 LILRB4Q8NHJ6 448 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 RIOK2Q9BVS4 552 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 FAM83DQ9H4H8 585 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 MTG2Q9H4K7 406 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CFAP20Q9Y6A4 193 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 KCNE1BA0A087WTH5 132 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 FABP12A6NFH5 140 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 IFNA14P01570 189 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CSNK1DP48730 415 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CAV3P56539 151 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 HSPB3Q12988 150 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 SPHARQ15513 63 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 BAK1Q16611 211 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 COQ8BQ96D53 544 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CRELD1Q96HD1 420 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TRPV5Q9NQA5 729 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TRPC4Q9UBN4 977 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 ANGPT4Q9Y264 503 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 A0A0G2JN53 185 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TLX2O43763 284 aaPredicted RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 CLEC2LP0C7M8 214 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CD72P21854 359 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 IDSP22304 550 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 PCGF2P35227 344 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 RORCP51449 518 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 CRISP1P54107 249 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 PRKAG1P54619 331 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 MTAPQ13126 283 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TARDBPQ13148 414 aaKnown RBP eCLIP12.79□□□□□ -0.36
NCDN-201ENST00000356090 ZNF367Q7RTV3 350 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 TMCO2Q7Z6W1 182 aaPredicted RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 DTX3Q8N9I9 347 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 NEIL2Q969S2 332 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 DACT3Q96B18 629 aaPredicted RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 SAMD11Q96NU1 681 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 GABARAPL3Q9BY60 117 aa12.79□□□□□ -0.36
NCDN-201ENST00000356090 SPIN1Q9Y657 262 aaPredicted RBP12.79□□□□□ -0.36
NCDN-201ENST00000356090 A0A1W2PRB8 838 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 OR6C70A6NIJ9 312 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 URODP06132 367 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 PTNP21246 168 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 PTGER1P34995 402 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 HTR3AP46098 478 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 AP1S2P56377 157 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 NFE2L1Q14494 772 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 DUSP7Q16829 419 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 MED27Q6P2C8 311 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 OLIG3Q7RTU3 272 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TRAPPC5Q8IUR0 188 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 SCRN2Q96FV2 425 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 CLCA3PQ9Y6N3 262 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 TRBV4-1A0A0J9YWV2 114 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 RTCAO00442 366 aaKnown RBP12.78□□□□□ -0.36
NCDN-201ENST00000356090 LRRTM2O43300 516 aa12.78□□□□□ -0.36
NCDN-201ENST00000356090 IFI30P13284 250 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms