RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 TFEBP19484 476 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 S100A5P33763 92 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 XCR1P46094 333 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 MARCKSL1P49006 195 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 ITGA8P53708 1063 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 SFT2D3Q587I9 215 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PTRHD1Q6GMV3 140 aaKnown RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 AFTPHQ6ULP2 937 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 BBS12Q6ZW61 710 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 ACAD11Q709F0 780 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PLD3Q8IV08 490 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 RCOR2Q8IZ40 523 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 SHISA5Q8N114 240 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 WFDC11Q8NEX6 87 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 OR6P1Q8NGX9 317 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 ACTL9Q8TC94 416 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 MCOLN3Q8TDD5 553 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 TLCD1Q96CP7 247 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 SNF8Q96H20 258 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 C18orf12Q96KH6 178 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 FOPNLQ96NB1 174 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 ALPK1Q96QP1 1244 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 CCDC68Q9H2F9 335 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 GOLPH3Q9H4A6 298 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 MMP25Q9NPA2 562 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 RABL2AQ9UBK7 228 aaPredicted RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 A0A088AWK7 358 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 E9PBE3 544 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 GOLGA8TH3BQL2 631 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 TXNDC9O14530 226 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PHF2O75151 1096 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PEX11AO75192 247 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 CDC123O75794 336 aaPredicted RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 RBP3P10745 1247 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 AOAHP28039 575 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PTDSS1P48651 473 aaKnown RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 CYB561P49447 251 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 AGTR2P50052 363 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 PTK6Q13882 451 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 FASTKD1Q53R41 847 aaKnown RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 SLC2A7Q6PXP3 512 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 ARSKQ6UWY0 536 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 LDB1Q86U70 411 aaPredicted RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 PAQR7Q86WK9 346 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 RPS19BP1Q86WX3 136 aaKnown RBP10.5□□□□□ -0.73
RTN3-204ENST00000354497 KATNAL2Q8IYT4 538 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 POGLUT1Q8NBL1 392 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 SPATA4Q8NEY3 305 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 OR51Q1Q8NH59 317 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 FNDC8Q8TC99 324 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 LPAR4Q99677 370 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 LRMDAQ9H2I8 198 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 LRRC40Q9H9A6 602 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 UBAP1Q9NZ09 502 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 SLC2A6Q9UGQ3 507 aa10.5□□□□□ -0.73
RTN3-204ENST00000354497 HCFC1P51610 2035 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 GRID2IPA4D2P6 1211 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 NPIPA2E9PIF3 369 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 NPIPA3F8WFD2 350 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SGK494L7N484 410 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SUPT3HO75486 399 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 KRT14P02533 472 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 INHBBP09529 407 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 PKMP14618 531 aaKnown RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 IL1RNP18510 177 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 PPARGP37231 505 aaPredicted RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 CCNFP41002 786 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SERPINB4P48594 390 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 OR4D2P58180 307 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 GPR85P60893 370 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SNRPNP63162 240 aaKnown RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 CUL1Q13616 776 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SEMA3AQ14563 771 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 USP10Q14694 798 aaKnown RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 ABRAXAS2Q15018 415 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 PRSS41Q7RTY9 318 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 PRIMA1Q86XR5 153 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 CDC20BQ86Y33 519 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 CREG2Q8IUH2 290 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SULF2Q8IWU5 870 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 ZBED8Q8IZ13 594 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 KIF2BQ8N4N8 673 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 OR5M9Q8NGP3 310 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 HMGCLL1Q8TB92 370 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 ZCCHC10Q8TBK6 192 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 OR2A5Q96R48 311 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SLC39A3Q9BRY0 314 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 DEFB127Q9H1M4 99 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 ZNF395Q9H8N7 513 aaPredicted RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 TAC3Q9UHF0 121 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 ANAPC5Q9UJX4 755 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 INTUQ9ULD6 942 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 SNX12Q9UMY4 172 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 KLF13Q9Y2Y9 288 aaPredicted RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.49□□□□□ -0.73
RTN3-204ENST00000354497 TIMM22Q9Y584 194 aa10.49□□□□□ -0.73
RTN3-204ENST00000354497 EPN1Q9Y6I3 576 aaPredicted RBP10.49□□□□□ -0.73
RTN3-204ENST00000354497 MROH6A6NGR9 719 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms