RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 WSCD2Q2TBF2 565 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 COL28A1Q2UY09 1125 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 TRIQKQ629K1 86 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 PIANPQ8IYJ0 282 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 ATAD1Q8NBU5 361 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 ZNF680Q8NEM1 530 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 ACPTQ9BZG2 426 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 CHST8Q9H2A9 424 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 NSUN3Q9H649 340 aaKnown RBP14.34□□□□□ -0.11
TRAF3-202ENST00000351691 RANBP3Q9H6Z4 567 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-202ENST00000351691 FOLH1BQ9HBA9 442 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 TMEM184CQ9NVA4 438 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 MCUBQ9NWR8 336 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
TRAF3-202ENST00000351691 PCDHB1Q9Y5F3 818 aa14.34□□□□□ -0.11
TRAF3-202ENST00000351691 SERTM1A2A2V5 107 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 MAGEB17A8MXT2 336 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 OR1I1O60431 355 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CSO75390 466 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CDRT1O95170 752 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CKBP12277 381 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 LPOP22079 712 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 RPS3P23396 243 aaKnown RBP eCLIP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PCGF2P35227 344 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CDKN1CP49918 316 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 SNRPGP62308 76 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 ABATP80404 500 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 DOC2BQ14184 412 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TMEM201Q5SNT2 666 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PSAPL1Q6NUJ1 521 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 GALNT10Q86SR1 603 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 LGI4Q8N135 537 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 LINC01599Q8WXQ3 324 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CREB3L1Q96BA8 519 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 EXOC2Q96KP1 924 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 NIPSNAP1Q9BPW8 284 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 FAM126AQ9BYI3 521 aaPredicted RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PIGUQ9H490 435 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 NT5DC2Q9H857 520 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 FAM120CQ9NX05 1096 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TMEM161AQ9NX61 479 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 FTSJ1Q9UET6 329 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 NDRG2Q9UN36 371 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 ING4Q9UNL4 249 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TTC3P53804 2025 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 FAM240BA0A1B0GVZ2 78 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TMEM229AB2RXF0 380 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 H7C0S8 307 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 H7C4K7 107 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 I3L521 148 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 SGK494L7N484 410 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 BTN3A3O00478 584 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 ACSL4O60488 711 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 SDC1P18827 310 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PRPS1L1P21108 318 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 ENPP1P22413 925 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 SDC2P34741 201 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CRYBA2P53672 197 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CDH4P55283 916 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 SELENOWP63302 87 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TEAD4Q15561 434 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CLLU1Q5K131 121 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 BICRALQ6AI39 1079 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PTCHD4Q6ZW05 846 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PROKR2Q8NFJ6 384 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 KLHL6Q8WZ60 621 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 TOE1Q96GM8 510 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 METTL2AQ96IZ6 378 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PSKH2Q96QS6 385 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 ELAC1Q9H777 363 aaKnown RBP14.33□□□□□ -0.12
TRAF3-202ENST00000351691 PPP1R3EQ9H7J1 279 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 THSD1Q9NS62 852 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 RNF215Q9Y6U7 377 aa14.33□□□□□ -0.12
TRAF3-202ENST00000351691 CHD5Q8TDI0 1954 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 MTMR11A4FU01 709 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 LOC730098B7Z3J9 87 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 LYRM1O43325 122 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 KDELR3O43731 214 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 ALDH1A1P00352 501 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 RAF1P04049 648 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 FHP07954 510 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 SLC2A2P11168 524 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-202ENST00000351691 ELNP15502 786 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 HK1P19367 917 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 HOXD9P28356 352 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-202ENST00000351691 MC4RP32245 332 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 PTGES3Q15185 160 aaKnown RBP14.32□□□□□ -0.12
TRAF3-202ENST00000351691 CIR1Q86X95 450 aaPredicted RBP14.32□□□□□ -0.12
TRAF3-202ENST00000351691 NANOGP1Q8N7R0 232 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 FAM46DQ8NEK8 389 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 MDGA1Q8NFP4 955 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 FCRL1Q96LA6 429 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 PANX1Q96RD7 426 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 RLIMQ9NVW2 624 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 TXNL4BQ9NX01 149 aaKnown RBP14.32□□□□□ -0.12
TRAF3-202ENST00000351691 ZNF451Q9Y4E5 1061 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 ASB4Q9Y574 426 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 PCDHB11Q9Y5F2 797 aa14.32□□□□□ -0.12
TRAF3-202ENST00000351691 SCN2BO60939 215 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms