RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 IFFO1Q0D2I5 559 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 KLF10Q13118 480 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ITIH4Q14624 930 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 SEZ6L2Q6UXD5 910 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 GCNT7Q6ZNI0 430 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 L3MBTL4Q8NA19 623 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 TMEM116Q8NCL8 245 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 HEXDCQ8WVB3 486 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 DNASE2BQ8WZ79 361 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 FBXL20Q96IG2 436 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 COPS8Q99627 209 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 RBBP8Q99708 897 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 TBCDQ9BTW9 1192 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 TP63Q9H3D4 680 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 MED4Q9NPJ6 270 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 EURLQ9NYK6 297 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PTGFRNQ9P2B2 879 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PRSS21Q9Y6M0 314 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PLXNB3Q9ULL4 1909 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 TP53BP1Q12888 1972 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PCDH15Q96QU1 1955 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 HMX2A2RU54 273 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 MEI4A8MW99 385 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 AGPSO00116 658 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 INPP4BO15327 924 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 RHOBTB1O94844 696 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ZIC2O95409 532 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ALBP02768 609 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 CFIP05156 583 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 IVLP07476 585 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 FAM58BPP0C7Q3 252 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ATP1B2P14415 290 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 GABRB1P18505 474 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 RPS3P23396 243 aaKnown RBP eCLIP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PTPN4P29074 926 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 EVI2BP34910 448 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 SPRP35270 261 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PTGS2P35354 604 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 NSG1P42857 185 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 CSNK1EP49674 416 aaKnown RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 SERPINB9P50453 376 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ARSFP54793 590 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 BNC1Q01954 994 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ILF2Q12905 390 aaKnown RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 CTSL3PQ5NE16 218 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ZNF648Q5T619 568 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ZNF549Q6P9A3 640 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 KYAT3Q6YP21 454 aaKnown RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 DBX2Q6ZNG2 339 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 SPATA19Q7Z5L4 167 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ABI3BPQ7Z7G0 1075 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ZC3HC1Q86WB0 502 aaKnown RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 RBFAQ8N0V3 343 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 FSTL5Q8N475 847 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 C16orf58Q96GQ5 468 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 SERAC1Q96JX3 654 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ARL5BQ96KC2 179 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 BIRC8Q96P09 236 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 LRRC37BQ96QE4 947 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 RHOJQ9H4E5 214 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ZFP57Q9NU63 452 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 KLHL14Q9P2G3 628 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 TXNDC16Q9P2K2 825 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 ANKMY1Q9P2S6 941 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 PSMC3IPQ9P2W1 217 aaPredicted RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 OR1A2Q9Y585 309 aa4.95□□□□□ -1.62
VCAM1-202ENST00000347652 CFAP20Q9Y6A4 193 aaKnown RBP4.95□□□□□ -1.62
VCAM1-202ENST00000347652 CABIN1Q9Y6J0 2220 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 CNOT1A5YKK6 2376 aaKnown RBP4.94□□□□□ -1.62
VCAM1-202ENST00000347652 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.94□□□□□ -1.62
VCAM1-202ENST00000347652 A0A1W2PR77 199 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 QSOX1O00391 747 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 RASGRF2O14827 1237 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 GSTA4O15217 222 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 ATP8B1O43520 1251 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 AP2A2O94973 939 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 MT-ATP6P00846 226 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 WNT1P04628 370 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 RPSAP08865 295 aaKnown RBP4.94□□□□□ -1.62
VCAM1-202ENST00000347652 STAG3L3P0CL85 134 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 RALBP11234 206 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 ZNF7P17097 686 aaPredicted RBP4.94□□□□□ -1.62
VCAM1-202ENST00000347652 MSH3P20585 1137 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 FMO4P31512 558 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 SLCO1A2P46721 670 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 CCT8P50990 548 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 LIMK2P53671 638 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 KIAA1024LP59773 190 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 ABATP80404 500 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 TIAL1Q01085 375 aaKnown RBP eCLIP4.94□□□□□ -1.62
VCAM1-202ENST00000347652 KCNAB2Q13303 367 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 IGSF11Q5DX21 431 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 PRRT3Q5FWE3 981 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 PRAMEF9Q5VWM5 478 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 KRT80Q6KB66 452 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 PRR23CQ6ZRP0 262 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 ESPNLQ6ZVH7 1005 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 SYT12Q8IV01 421 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 CYP4X1Q8N118 509 aa4.94□□□□□ -1.62
VCAM1-202ENST00000347652 RIBC1Q8N443 379 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms