RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MAFIPQ8WZ33 124 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 FEVQ99581 238 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 SLC35F4A4IF30 521 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 ABRAXAS2Q15018 415 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 CHRNA6Q15825 494 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 LHFPL3Q86UP9 236 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 RGMAQ96B86 450 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 COQ10AQ96MF6 247 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 ZNF558Q96NG5 402 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 IFNA21P01568 189 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 FGL1Q08830 312 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 KLRG1Q96E93 195 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 OLAHQ9NV23 265 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 OARD1Q9Y530 152 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 RBM7Q9Y580 266 aaKnown RBP17.43■□□□□ 0.38
SMC4-201ENST00000344722 MYH15Q9Y2K3 1946 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 PGAM2P15259 253 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 UQCRC2P22695 453 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 KELP23276 732 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 VAMP1P23763 118 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 RPS5P46782 204 aaKnown RBP17.43■□□□□ 0.38
SMC4-201ENST00000344722 SLC22A10Q63ZE4 541 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 HS3ST5Q8IZT8 346 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 REEP4Q9H6H4 257 aa17.43■□□□□ 0.38
SMC4-201ENST00000344722 TEX13CA0A0J9YWL9 993 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 NEDD8-MDP1E9PL57 170 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 SMIM18P0DKX4 95 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 SF3A2Q15428 464 aaKnown RBP17.42■□□□□ 0.38
SMC4-201ENST00000344722 BCL2L15Q5TBC7 163 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 SYNPOQ8N3V7 929 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 OR8K5Q8NH50 307 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 SGCDQ92629 289 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 THRSPQ92748 146 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 IMP4Q96G21 291 aaKnown RBP17.42■□□□□ 0.38
SMC4-201ENST00000344722 QPCTLQ9NXS2 382 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 MYH2Q9UKX2 1941 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 TREHO43280 583 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 ZNF763Q0D2J5 394 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 AIMP2Q13155 320 aaKnown RBP17.42■□□□□ 0.38
SMC4-201ENST00000344722 UAP1L1Q3KQV9 507 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 ZNF691Q5VV52 312 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 TMEM185BQ9H7F4 350 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 AOC2O75106 756 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 ACVRL1P37023 503 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 RPL35P42766 123 aaKnown RBP17.42■□□□□ 0.38
SMC4-201ENST00000344722 PGGT1BP53609 377 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 CLDN8P56748 225 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 RCAN2Q14206 197 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 SELPLGQ14242 412 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 MAD2L1BPQ15013 274 aaPredicted RBP17.42■□□□□ 0.38
SMC4-201ENST00000344722 PON3Q15166 354 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 GPR151Q8TDV0 419 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.382e-11■■■■■ 40.4
SMC4-201ENST00000344722 PTERQ96BW5 349 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 CHFRQ96EP1 664 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 GNG8Q9UK08 70 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 ALPIP09923 528 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 TAS2R50P59544 299 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 METTL4Q8N3J2 472 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 YIPF4Q9BSR8 244 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 PLEKHA1Q9HB21 404 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 PCDHB16Q9NRJ7 776 aa17.42■□□□□ 0.38
SMC4-201ENST00000344722 LTN1O94822 1766 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 C13orf42A0A1B0GVH6 325 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 BMP8BP34820 402 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 EVI2BP34910 448 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 EIF2S3P41091 472 aaKnown RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 EIF2DP41214 584 aaKnown RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 CCR8P51685 355 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 PAGE3Q5JUK9 113 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 GET4Q7L5D6 327 aaPredicted RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 BMP8AQ7Z5Y6 402 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 SPRED1Q7Z699 444 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 ADAD1Q96M93 576 aaKnown RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 PDYNP01213 254 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 SLC35G6P0C7Q6 338 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 IDSP22304 550 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 BTN3A2P78410 334 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 APOFQ13790 326 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 OR4D1Q15615 310 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 TIGD5Q53EQ6 642 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 YIPF7Q8N8F6 280 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 OR51G2Q8NGK0 314 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 MED30Q96HR3 178 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 SLC2A13Q96QE2 648 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 LRRTM2O43300 516 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 FUCA1P04066 466 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 GABRR2P28476 465 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 MC1RQ01726 317 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 ISCA2Q86U28 154 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 LILRA2Q8N149 483 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 OR2L2Q8NH16 312 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 NETO1Q8TDF5 533 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 GSTO2Q9H4Y5 243 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 PLEKHA6Q9Y2H5 1048 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 CAMTA1Q9Y6Y1 1673 aa17.41■□□□□ 0.38
SMC4-201ENST00000344722 F5H0A9 414 aaPredicted RBP17.41■□□□□ 0.38
SMC4-201ENST00000344722 CACNB4O00305 520 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms