RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 DMRTB1Q96MA1 342 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 ASPNQ9BXN1 380 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 BRF2Q9HAW0 419 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 C11orf16Q9NQ32 467 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 RAB23Q9ULC3 237 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 PPIL1Q9Y3C6 166 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 V9GYH0 126 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 NINQ8N4C6 2090 aa20.14■□□□□ 0.81
E2F1-201ENST00000343380 EFCAB10A6NFE3 127 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 NRG2O14511 850 aaPredicted RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 SLCO2B1O94956 709 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 MFN2O95140 757 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 EFEMP2O95967 443 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 GSTM1P09488 218 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 RACK1P63244 317 aaKnown RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 CDK6Q00534 326 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 GPR50Q13585 617 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 DUSP7Q16829 419 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 FRMPD2BQ6IN97 320 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 VASH1Q7L8A9 365 aaPredicted RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 BCDIN3DQ7Z5W3 292 aaKnown RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 LAX1Q8IWV1 398 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 OR52N2Q8NGI0 321 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 ASZ1Q8WWH4 475 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 TRNT1Q96Q11 434 aaKnown RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 RSPO3Q9BXY4 272 aaPredicted RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 NMNAT1Q9HAN9 279 aaPredicted RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 BACE2Q9Y5Z0 518 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 HELZP42694 1942 aaKnown RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 FFAR1O14842 300 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 KLHL18O94889 574 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 LATS1O95835 1130 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 IMPA1P29218 277 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 HNF4AP41235 474 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 SNRPD1P62314 119 aaKnown RBP20.13■□□□□ 0.81
E2F1-201ENST00000343380 ZNF79Q15937 498 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 SLX4IPQ5VYV7 408 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 HSD11B1LQ7Z5J1 315 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 MMP21Q8N119 569 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.13■□□□□ 0.81
E2F1-201ENST00000343380 VPS35Q96QK1 796 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 CCDC88CQ9P219 2028 aa20.13■□□□□ 0.81
E2F1-201ENST00000343380 PSIP1O75475 530 aaKnown RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 SLITRK5O94991 958 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 HMGA2P52926 109 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CRISP1P54107 249 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CCL23P55773 120 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CYP4F8P98187 520 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 THOC7Q6I9Y2 204 aaKnown RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 Q6ZVL8 140 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CMTM8Q8IZV2 173 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 WDR48Q8TAF3 677 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 C9orf43Q8TAL5 461 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 ST6GAL2Q96JF0 529 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 MAGEB10Q96LZ2 347 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 PKP4Q99569 1192 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 TMEM175Q9BSA9 504 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CCDC32Q9BV29 185 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 REEP4Q9H6H4 257 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 RRAGCQ9HB90 399 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 TRBV4-1A0A0J9YWV2 114 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 TRBC2A0A5B9 178 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CAPN5O15484 640 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 HOXC11O43248 304 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 TSPAN6O43657 245 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 SOX14O95416 240 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 SELPP16109 830 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CTSCP53634 463 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 ZNF33BQ06732 778 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 PUM1Q14671 1186 aaKnown RBP eCLIP20.12■□□□□ 0.81
E2F1-201ENST00000343380 ZNF770Q6IQ21 691 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 C22orf39Q6P5X5 142 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 COMMD6Q7Z4G1 85 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 TMPRSS11BQ86T26 416 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 LAS2Q8IYD9 372 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 GOT1L1Q8NHS2 421 aaPredicted RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 GEMIN6Q8WXD5 167 aaKnown RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 SNTG1Q9NSN8 517 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 DDX28Q9NUL7 540 aaKnown RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 TAS2R9Q9NYW1 312 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CNOT2Q9NZN8 540 aaKnown RBP20.12■□□□□ 0.81
E2F1-201ENST00000343380 DNAJC27Q9NZQ0 273 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 CFAP97Q9P2B7 532 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 AP1M2Q9Y6Q5 423 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 PCM1Q15154 2024 aa20.12■□□□□ 0.81
E2F1-201ENST00000343380 A0A075B6Q4 140 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 ANKRD34BA5PLL1 514 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 PRRG1O14668 218 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 NPC1O15118 1278 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 PTX3P26022 381 aaPredicted RBP20.11■□□□□ 0.81
E2F1-201ENST00000343380 OPRD1P41143 372 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 TOR1AIP1Q5JTV8 583 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 ZNF544Q6NX49 715 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 AUTS2Q8WXX7 1259 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 WRAP53Q9BUR4 548 aaKnown RBP20.11■□□□□ 0.81
E2F1-201ENST00000343380 BHLHE41Q9C0J9 482 aaPredicted RBP20.11■□□□□ 0.81
E2F1-201ENST00000343380 IL21Q9HBE4 155 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 CLN6Q9NWW5 311 aa20.11■□□□□ 0.81
E2F1-201ENST00000343380 ATP6V1HQ9UI12 483 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms