RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 HBEGFQ99075 208 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 NELL2Q99435 816 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 OSMRQ99650 979 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 GPR21Q99679 349 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 INPP5KQ9BT40 448 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 NEU3Q9UQ49 428 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 STK25O00506 426 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 CASC3O15234 703 aaKnown RBP17.78■□□□□ 0.44
SMPD1-201ENST00000342245 APOL3O95236 402 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 ADRA2AP08913 450 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 CPEP16870 476 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 DNASE1P24855 282 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 HSPA7P48741 367 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 SNRPGP62308 76 aaKnown RBP17.78■□□□□ 0.44
SMPD1-201ENST00000342245 PLA1AQ53H76 456 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF704Q6ZNC4 412 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-201ENST00000342245 FAM92BQ6ZTR7 304 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 UXS1Q8NBZ7 420 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 OR4C15Q8NGM1 316 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 ESAMQ96AP7 390 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 B3GAT2Q9NPZ5 323 aa17.78■□□□□ 0.44
SMPD1-201ENST00000342245 CLIC1O00299 241 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 SLC19A2O60779 497 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 MMP20O60882 483 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 GRM7Q14831 915 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 PCBP1Q15365 356 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMPD1-201ENST00000342245 NHLRC3Q5JS37 347 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 MPP7Q5T2T1 576 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 HACD4Q5VWC8 232 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 RASSF6Q6ZTQ3 369 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 ZNF551Q7Z340 670 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-201ENST00000342245 PDZD3Q86UT5 571 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 FAM217AQ8IXS0 508 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 LGI4Q8N135 537 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 OR8D4Q8NGM9 314 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 DOHHQ9BU89 302 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 KATNB1Q9BVA0 655 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 OR51J1Q9H342 316 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 SLCO1C1Q9NYB5 712 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 RGS17Q9UGC6 210 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-201ENST00000342245 ADAMTS5Q9UNA0 930 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 MED16Q9Y2X0 877 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 RPL36Q9Y3U8 105 aaKnown RBP17.77■□□□□ 0.44
SMPD1-201ENST00000342245 ASB1Q9Y576 335 aa17.77■□□□□ 0.44
SMPD1-201ENST00000342245 COL11A1P12107 1806 aaPredicted RBP17.77■□□□□ 0.44
SMPD1-201ENST00000342245 ZAR1LA6NP61 321 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 LINC01387J3KSC0 135 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 ULK1O75385 1050 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 NDUFS3O75489 264 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 BCKDHAP12694 445 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 CAMK2DQ13557 499 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 PTGES3Q15185 160 aaKnown RBP17.77■□□□□ 0.43
SMPD1-201ENST00000342245 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.77■□□□□ 0.43
SMPD1-201ENST00000342245 SUSD1Q6UWL2 747 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 CHMP1BQ7LBR1 199 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 PCNPQ8WW12 178 aaKnown RBP17.77■□□□□ 0.43
SMPD1-201ENST00000342245 IPPKQ9H8X2 491 aa17.77■□□□□ 0.43
SMPD1-201ENST00000342245 MEIKINA0A087WXM9 373 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 BEST1O76090 585 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 IGHA2P01877 340 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PEPDP12955 493 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 DARSP14868 501 aaKnown RBP17.76■□□□□ 0.43
SMPD1-201ENST00000342245 ITKQ08881 620 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 C6orf132Q5T0Z8 1188 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 BCL2L15Q5TBC7 163 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 C22orf42Q6IC83 251 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 SLC22A8Q8TCC7 542 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 INTS12Q96CB8 462 aaKnown RBP17.76■□□□□ 0.43
SMPD1-201ENST00000342245 ZIC5Q96T25 663 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 MED10Q9BTT4 135 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 RBCK1Q9BYM8 510 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 SLC19A3Q9BZV2 496 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 ZNF408Q9H9D4 720 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 HCN3Q9P1Z3 774 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 COMMD3Q9UBI1 195 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 KCTD3Q9Y597 815 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 F8W810 466 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PSIP1O75475 530 aaKnown RBP17.76■□□□□ 0.43
SMPD1-201ENST00000342245 FGF1P05230 155 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 HLA-DPA1P20036 260 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 ZNF91Q05481 1191 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PLK5Q496M5 336 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 TMEM201Q5SNT2 666 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 GPR155Q7Z3F1 870 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PTOV1Q86YD1 416 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 OR6C4Q8NGE1 309 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 FDXACB1Q9BRP7 624 aaPredicted RBP17.76■□□□□ 0.43
SMPD1-201ENST00000342245 NT5MQ9NPB1 228 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PDGFCQ9NRA1 345 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 UBQLN1Q9UMX0 589 aaKnown RBP17.76■□□□□ 0.43
SMPD1-201ENST00000342245 NUBP2Q9Y5Y2 271 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 BPTFQ12830 3046 aa17.76■□□□□ 0.43
SMPD1-201ENST00000342245 PIRO00625 290 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 OR1I1O60431 355 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 ATXN1LP0C7T5 689 aaKnown RBP17.75■□□□□ 0.43
SMPD1-201ENST00000342245 MMP12P39900 470 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 AGFG1P52594 562 aaKnown RBP17.75■□□□□ 0.43
SMPD1-201ENST00000342245 DSG2Q14126 1118 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 DOC2BQ14184 412 aa17.75■□□□□ 0.43
SMPD1-201ENST00000342245 GPR176Q14439 515 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms