RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ANKRA2Q9H9E1 313 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 LIN7BQ9HAP6 207 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 ACER3Q9NUN7 267 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 FAM120CQ9NX05 1096 aaKnown RBP12.26□□□□□ -0.45
CCDC60-201ENST00000327554 RWDD3Q9Y3V2 267 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PCDHGC4Q9Y5F7 938 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 PCDHGB7Q9Y5F8 929 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
CCDC60-201ENST00000327554 LOC102723532A0A0G2JNH3 316 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 C1orf226A1L170 272 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 A8MUA0 341 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 NPIPB8E9PQR5 432 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 TREHO43280 583 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ORC5O43913 435 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PCDH7O60245 1069 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 TBX18O95935 607 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PRKAR1AP10644 381 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
CCDC60-201ENST00000327554 SDC2P34741 201 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 MAPKAPK2P49137 400 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 DGKEP52429 567 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 RAB25P57735 213 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 NCF4Q15080 339 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ANGPT1Q15389 498 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 RGNQ15493 299 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CD300LGQ6UXG3 332 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 GALNT11Q8NCW6 608 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 FAM46DQ8NEK8 389 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 OR7D4Q8NG98 312 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 OR8J2Q8NGG1 315 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 FCRL1Q96LA6 429 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 COPS8Q99627 209 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 BOCQ9BWV1 1114 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 HEXA-AS1Q9H8Q6 139 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 THSD1Q9NS62 852 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 DNAJC27Q9NZQ0 273 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ANKRD66B4E2M5 251 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 SLC9A3R1O14745 358 aaPredicted RBP12.25□□□□□ -0.45
CCDC60-201ENST00000327554 SNAI1O95863 264 aaPredicted RBP12.25□□□□□ -0.45
CCDC60-201ENST00000327554 LAMP1P11279 417 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 COX7A2P14406 83 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 IL32P24001 234 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CACNG1Q06432 222 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 GAB1Q13480 694 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CDH18Q13634 790 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF267Q14586 743 aaPredicted RBP12.25□□□□□ -0.45
CCDC60-201ENST00000327554 FLYWCH1Q4VC44 716 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 SDHAF4Q5VUM1 108 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CNIH2Q6PI25 160 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF730Q6ZMV8 503 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PDZD3Q86UT5 571 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 MON1AQ86VX9 555 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 SYT12Q8IV01 421 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 NAGSQ8N159 534 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 GHDCQ8N2G8 530 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 ZNF366Q8N895 744 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 AQP11Q8NBQ7 271 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PROKR2Q8NFJ6 384 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PMEPA1Q969W9 287 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 MSANTD3Q96H12 275 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 NELL2Q99435 816 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 KCNJ15Q99712 375 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM43Q9BTV4 400 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 HTATIP2Q9BUP3 242 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 KATNB1Q9BVA0 655 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
CCDC60-201ENST00000327554 MALT1Q9UDY8 824 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 PRSS21Q9Y6M0 314 aa12.25□□□□□ -0.45
CCDC60-201ENST00000327554 CCDC88CQ9P219 2028 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 RPS10-NUDT3A0A1W2PQS6 291 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 ARL5CA6NH57 179 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 INMT-MINDY4F8WBC2 141 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 DGKAP23743 735 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 RPL9P32969 192 aaKnown RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 AGFG1P52594 562 aaKnown RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 CRYBB1P53674 252 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 SNRPGP62308 76 aaKnown RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 ARHGEF7Q14155 803 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 AANATQ16613 207 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 ZXDCQ2QGD7 858 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 CYP27C1Q4G0S4 372 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 DUSP28Q4G0W2 176 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 DALRD3Q5D0E6 543 aaKnown RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 TMEM201Q5SNT2 666 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 SPATA2LQ8IUW3 424 aaPredicted RBP12.24□□□□□ -0.45
CCDC60-201ENST00000327554 SCN4BQ8IWT1 228 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 TIGD4Q8IY51 512 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 RNF175Q8N4F7 328 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 SYT14Q8NB59 555 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 C11orf65Q8NCR3 313 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 KLHDC9Q8NEP7 349 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 HASPINQ8TF76 798 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 PIH1D2Q8WWB5 315 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 MED18Q9BUE0 208 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 C11orf16Q9NQ32 467 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 SCML2Q9UQR0 700 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 CDH10Q9Y6N8 788 aa12.24□□□□□ -0.45
CCDC60-201ENST00000327554 DSPPQ9NZW4 1301 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms