RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FAM129BQ96TA1 746 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 SPATA9Q9BWV2 254 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 MS4A12Q9NXJ0 267 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 A0A0G2JN53 185 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 IRS1P35568 1242 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 VIPR2P41587 438 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 PNLIPRP1P54315 467 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 OXA1LQ15070 435 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 COLEC12Q5KU26 742 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 TMIGD1Q6UXZ0 262 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 FAM83HQ6ZRV2 1179 aaPredicted RBP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 SPRED2Q7Z698 418 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 CLIP4Q8N3C7 705 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 MYDGFQ969H8 173 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 NUS1Q96E22 293 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 METTL2AQ96IZ6 378 aaKnown RBP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 CHCHD6Q9BRQ6 235 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 MIR1-1HGQ9H1L0 117 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 EHD1Q9H4M9 534 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 EPS8L2Q9H6S3 715 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 ZNF226Q9NYT6 803 aa16.65■□□□□ 0.26
COL9A1-201ENST00000320755 HELZP42694 1942 aaKnown RBP16.65■□□□□ 0.26
COL9A1-201ENST00000320755 CLCA1A8K7I4 914 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 KLHL18O94889 574 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 GADD45GO95257 159 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 GRK5P34947 590 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 SLC6A11P48066 632 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 SEPHS1P49903 392 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 RAB15P59190 212 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 CARTPTQ16568 116 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 OR51E2Q9H255 320 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 DSN1Q9H410 356 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 PCDHGA2Q9Y5H1 932 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 PRRT4C9JH25 899 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ZSCAN9O15535 394 aaPredicted RBP16.64■□□□□ 0.25
COL9A1-201ENST00000320755 TLL1O43897 1013 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 PTHP01270 115 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 C6P13671 934 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ANXA8P13928 327 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 TP53BP2Q13625 1128 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 UAP1L1Q3KQV9 507 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 LEXMQ3ZCV2 418 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 FAM71E1Q6IPT2 247 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 FAM43BQ6ZT52 329 aaPredicted RBP16.64■□□□□ 0.25
COL9A1-201ENST00000320755 DSG4Q86SJ6 1040 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 AQP11Q8NBQ7 271 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF675Q8TD23 568 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ARRDC3Q96B67 414 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 F2RL3Q96RI0 385 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 IL4I1Q96RQ9 567 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 MROQ9BYG7 248 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ZNF229Q9UJW7 825 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 MAPRE3Q9UPY8 281 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 CKAP5Q14008 2032 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 CXorf51AA0A1B0GTR3 108 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 FEZF1A0PJY2 475 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ADAM23O75077 832 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 STATHP02808 62 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 SERPIND1P05546 499 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 CEBPBP17676 345 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 RANBP2P49792 3224 aaKnown RBP16.64■□□□□ 0.25
COL9A1-201ENST00000320755 SLC13A2Q13183 592 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 CEACAM20Q6UY09 585 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 OXR1Q8N573 874 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 MRPL43Q8N983 215 aaKnown RBP16.64■□□□□ 0.25
COL9A1-201ENST00000320755 BTBD2Q9BX70 525 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 ACER3Q9NUN7 267 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 POFUT2Q9Y2G5 429 aa16.64■□□□□ 0.25
COL9A1-201ENST00000320755 SPINT1O43278 529 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 CYP17A1P05093 508 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 FEN1P39748 380 aaKnown RBP16.63■□□□□ 0.25
COL9A1-201ENST00000320755 PRMT2P55345 433 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 HSPB3Q12988 150 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 LRRC26Q2I0M4 334 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 HMGN2P46Q86SG4 172 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 SLC22A16Q86VW1 577 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 NLRP8Q86W28 1048 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 CACTIN-AS1Q8N1I8 211 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 TAAR2Q9P1P5 351 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 TAC3Q9UHF0 121 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 TSPAN11A1L157 253 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 FOXE1O00358 373 aaPredicted RBP16.63■□□□□ 0.25
COL9A1-201ENST00000320755 SERPINB7O75635 380 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 BCHEP06276 602 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 CDK1P06493 297 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 ADH5P11766 374 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 PTGES3Q15185 160 aaKnown RBP16.63■□□□□ 0.25
COL9A1-201ENST00000320755 MED22Q15528 200 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 ARMCX4Q5H9R4 360 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 PRAMEF14Q5SWL7 426 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 UBE2UQ5VVX9 321 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 PRAMEF13Q5VWM6 474 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 TRIM73Q86UV7 250 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 OR4C15Q8NGM1 316 aa16.63■□□□□ 0.25
COL9A1-201ENST00000320755 VANGL1Q8TAA9 524 aaPredicted RBP16.63■□□□□ 0.25
COL9A1-201ENST00000320755 COQ10AQ96MF6 247 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms