RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 CCNB2O95067 398 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 KLK1P06870 262 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 PPIBP23284 216 aaKnown RBP14.27□□□□□ -0.12
TFE3-201ENST00000315869 IRS1P35568 1242 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 UGT2B15P54855 530 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 TAS2R50P59544 299 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 MTAPQ13126 283 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.12
TFE3-201ENST00000315869 ZNF284Q2VY69 593 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 LRIT3Q3SXY7 679 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 SPDYE7PQ495Y7 208 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 IQCCQ4KMZ1 466 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 ZNF385BQ569K4 471 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 ZNF783Q6ZMS7 281 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 OR8J2Q8NGG1 315 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 IL21Q9HBE4 155 aa14.27□□□□□ -0.12
TFE3-201ENST00000315869 ZNF282Q9UDV7 671 aaPredicted RBP14.27□□□□□ -0.12
TFE3-201ENST00000315869 TAF4O00268 1085 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 WWP2O00308 870 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 C1SP09871 688 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 OLR1P78380 273 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 ZNF45Q02386 682 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 SLBPQ14493 270 aaKnown RBP eCLIP14.27□□□□□ -0.13
TFE3-201ENST00000315869 PNCKQ6P2M8 343 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 TRMT11Q7Z4G4 463 aaKnown RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 BCDIN3DQ7Z5W3 292 aaKnown RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 C11orf96Q7Z7L8 435 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 BEX2Q9BXY8 128 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CRISPLD2Q9H0B8 497 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 ZNF226Q9NYT6 803 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 SLC25A13Q9UJS0 675 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CORO2BQ9UQ03 480 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 NUMA1Q14980 2115 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 DYRK3O43781 588 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 ARHGEF15O94989 841 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 IGFBP1P08833 259 aaPredicted RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 LAG3P18627 525 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 IDSP22304 550 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 ACVR2AP27037 513 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 PDHA2P29803 388 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CTNNB1P35222 781 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CASP3P42574 277 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 TGM4P49221 684 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CTSCP53634 463 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 RAB33AQ14088 237 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 GGTA1PQ4G0N0 100 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 BCL7AQ4VC05 210 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 LIPJQ5W064 366 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 TRIM40Q6P9F5 258 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 TRAPPC5Q8IUR0 188 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CBARPQ8N350 705 aaPredicted RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 RAB8BQ92930 207 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 NEIL2Q969S2 332 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 SAMD11Q96NU1 681 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 TRNT1Q96Q11 434 aaKnown RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 PITX2Q99697 317 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 SORBS1Q9BX66 1292 aaKnown RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 STOX2Q9P2F5 926 aaPredicted RBP14.27□□□□□ -0.13
TFE3-201ENST00000315869 KLHL3Q9UH77 587 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 ZNF221Q9UK13 617 aa14.27□□□□□ -0.13
TFE3-201ENST00000315869 CKAP5Q14008 2032 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 PRMT3O60678 531 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 SERPIND1P05546 499 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 HNF4AP41235 474 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 PIK3CBP42338 1070 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 MICAQ29983 383 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 TIMM50Q3ZCQ8 353 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 MED27Q6P2C8 311 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 TMEM220Q6QAJ8 160 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 NEK10Q6ZWH5 1172 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 UBASH3BQ8TF42 649 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 SLC30A2Q9BRI3 323 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 ASPNQ9BXN1 380 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 DYRK4Q9NR20 520 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 HCN4Q9Y3Q4 1203 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 SPTBN5Q9NRC6 3674 aaKnown RBP14.26□□□□□ -0.13
TFE3-201ENST00000315869 PRAMEF33A0A0G2JMD5 474 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 HAT1O14929 419 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 PRAMEF10O60809 474 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 ITGA2P17301 1181 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 GJA8P48165 433 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 CRYBA2P53672 197 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 SLC5A12Q1EHB4 618 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 RPS26P11Q5JNZ5 115 aaPredicted RBP14.26□□□□□ -0.13
TFE3-201ENST00000315869 METTL2BQ6P1Q9 378 aaKnown RBP14.26□□□□□ -0.13
TFE3-201ENST00000315869 HSD11B1LQ7Z5J1 315 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 CELF5Q8N6W0 485 aaKnown RBP14.26□□□□□ -0.13
TFE3-201ENST00000315869 KREMEN2Q8NCW0 462 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 CYB5D2Q8WUJ1 264 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 OVCA2Q8WZ82 227 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 WRAP53Q9BUR4 548 aaKnown RBP14.26□□□□□ -0.13
TFE3-201ENST00000315869 DYRK1BQ9Y463 629 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 CNTRLQ7Z7A1 2325 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 GBF1Q92538 1859 aa14.26□□□□□ -0.13
TFE3-201ENST00000315869 AP3D1O14617 1153 aa14.25□□□□□ -0.13
TFE3-201ENST00000315869 SNX4O95219 450 aa14.25□□□□□ -0.13
TFE3-201ENST00000315869 IFNW1P05000 195 aa14.25□□□□□ -0.13
TFE3-201ENST00000315869 TIA1P31483 386 aaKnown RBP eCLIP14.25□□□□□ -0.13
TFE3-201ENST00000315869 UBE3AQ05086 875 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms