RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SYT14Q8NB59 555 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 CCDC120Q96HB5 630 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 NMNAT1Q9HAN9 279 aaPredicted RBP14.07□□□□□ -0.16
COL6A2-202ENST00000310645 ACER3Q9NUN7 267 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 STUB1Q9UNE7 303 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 SNX11Q9Y5W9 270 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 BRCA2P51587 3418 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 KCNE1BA0A087WTH5 132 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 CLDN11O75508 207 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 PSMA3P25788 255 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 CCR7P32248 378 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 C19orf57Q0VDD7 668 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 FAM180BQ6P0A1 224 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 XKRXQ6PP77 449 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 TSPAN33Q86UF1 283 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 KLHL6Q8WZ60 621 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 MCUBQ9NWR8 336 aa14.07□□□□□ -0.16
COL6A2-202ENST00000310645 CD160O95971 181 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 KLKB1P03952 638 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ZNF865P0CJ78 1059 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 CSTF2P33240 577 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 PCGF2P35227 344 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ATP5C1P36542 298 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 INPP1P49441 399 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 RING1Q06587 406 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 CDH18Q13634 790 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 VRK3Q8IV63 474 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TCEANCQ8N8B7 351 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 SPERTQ8NA61 448 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 HJURPQ8NCD3 748 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 OR4M1Q8NGD0 313 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 FUBP3Q96I24 572 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 DNAJC11Q9NVH1 559 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 CNOT2Q9NZN8 540 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 MBD1Q9UIS9 605 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 COL4A4P53420 1690 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 MTX2O75431 263 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 RPS3P23396 243 aaKnown RBP eCLIP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 CORO1AP31146 461 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 MAP2K3P46734 347 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 GLYR1Q49A26 553 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 DDI2Q5TDH0 399 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 LCN1P1Q5VSP4 162 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TIGD4Q8IY51 512 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 FAM46DQ8NEK8 389 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 OR8J2Q8NGG1 315 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 MED8Q96G25 268 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TMEM80Q96HE8 168 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 P2RY13Q9BPV8 354 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 NARFLQ9H6Q4 476 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 KCTD5Q9NXV2 234 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TMCC3Q9ULS5 477 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 SPIN1Q9Y657 262 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 PRRC2BQ5JSZ5 2229 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 FADS2P1A8MWK0 482 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ALPPP05187 535 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 SLC2A2P11168 524 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ALAS2P22557 587 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 SOAT1P35610 550 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ALDH6A1Q02252 535 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TEAD4Q15561 434 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 WSCD2Q2TBF2 565 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 MSANTD1Q6ZTZ1 278 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 FAM20CQ8IXL6 584 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 ANGPTL6Q8NI99 470 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 RDH14Q9HBH5 336 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 TXNL4BQ9NX01 149 aaKnown RBP14.06□□□□□ -0.16
COL6A2-202ENST00000310645 RNF181Q9P0P0 153 aa14.06□□□□□ -0.16
COL6A2-202ENST00000310645 LOC102723532A0A0G2JNH3 316 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 SH3D21A4FU49 640 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 C2orf78A6NCI8 922 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 SCAMP2O15127 329 aaKnown RBP14.05□□□□□ -0.16
COL6A2-202ENST00000310645 TNNI3P19429 210 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
COL6A2-202ENST00000310645 RFLNAQ6ZTI6 216 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 PHC2Q8IXK0 858 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 IQCF1Q8N6M8 205 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 CREB3L4Q8TEY5 395 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 PCNPQ8WW12 178 aaKnown RBP14.05□□□□□ -0.16
COL6A2-202ENST00000310645 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 MAPKAP1Q9BPZ7 522 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 SLC35A5Q9BS91 424 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 GALNT9Q9HCQ5 603 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 GPATCH2Q9NW75 528 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 ING3Q9NXR8 418 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 MAPRE3Q9UPY8 281 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 TRBC2A0A5B9 178 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 ZNF623O75123 536 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 PDE9AO76083 593 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 ETHE1O95571 254 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 C6orf47O95873 294 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 HNF1BP35680 557 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 HBA1P69905 142 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 BNC1Q01954 994 aa14.05□□□□□ -0.16
COL6A2-202ENST00000310645 C1DQ13901 141 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms