RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 USP34Q70CQ2 3546 aa21.41■■□□□ 1.02
IRF3-201ENST00000309877 IGHV5-51A0A0C4DH38 117 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 KHNYNO15037 678 aaKnown RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 CPSF4O95639 269 aaKnown RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 B3GALT4O96024 378 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 ENGP17813 658 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 ZNF10P21506 573 aaPredicted RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 CD1CP29017 333 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 MLLT3P42568 568 aaPredicted RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 TRPC1P48995 793 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 LRRC74AQ0VAA2 488 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 ZNF385BQ569K4 471 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 RABL3Q5HYI8 236 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 USP53Q70EK8 1073 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 MMP21Q8N119 569 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 GBP5Q96PP8 586 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 PANX1Q96RD7 426 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 PAIP1Q9H074 479 aaKnown RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 PDE7BQ9NP56 450 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 VAPAQ9P0L0 249 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 NME4O00746 187 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 TXNDC9O14530 226 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 PCDHGA12O60330 932 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 SRPX2O60687 465 aaPredicted RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 SCN2BO60939 215 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 ZBTB11O95625 1053 aaPredicted RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 DRD2P14416 443 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 NUBP1P53384 320 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 LRIF1Q5T3J3 769 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 FBXW10Q5XX13 1052 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 GUSBP11Q6P575 273 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 SPRED1Q7Z699 444 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 CARFQ8N187 725 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 MIEF2Q96C03 454 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 TRIM8Q9BZR9 551 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 LYARQ9NX58 379 aaKnown RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 TEX10Q9NXF1 929 aaPredicted RBP21.4■■□□□ 1.02
IRF3-201ENST00000309877 CD300AQ9UGN4 299 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 BTNL2Q9UIR0 455 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 FBXW2Q9UKT8 454 aa21.4■■□□□ 1.02
IRF3-201ENST00000309877 PRORSD1PA6NEY8 169 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 RNASET2O00584 256 aaKnown RBP21.39■■□□□ 1.01
IRF3-201ENST00000309877 GSNP06396 782 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 SMIM10L1P0DMW3 83 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 MSX2P35548 267 aaPredicted RBP21.39■■□□□ 1.01
IRF3-201ENST00000309877 ARL4DP49703 201 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 SPATS1Q496A3 300 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 NDUFAF5Q5TEU4 345 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 MRM1Q6IN84 353 aaKnown RBP21.39■■□□□ 1.01
IRF3-201ENST00000309877 CLECL1Q8IZS7 167 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 FAM156AQ8NDB6 213 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 OR8J3Q8NGG0 315 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 SMIM10Q96HG1 83 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 CCDC115Q96NT0 180 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 ANKRD27Q96NW4 1050 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 SERINC2Q96SA4 455 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 SH3GL1Q99961 368 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 C11orf16Q9NQ32 467 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 PLCL2Q9UPR0 1127 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 PCDHB14Q9Y5E9 798 aa21.39■■□□□ 1.01
IRF3-201ENST00000309877 MDC1Q14676 2089 aaKnown RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 LY6G6EA0A0G2JKS1 128 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 TNFRSF10AO00220 468 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 NVLO15381 856 aaKnown RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 HCRTR1O43613 425 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 ENTPD5O75356 428 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 SCELO95171 688 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 ALOX12P18054 663 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 EFNA1P20827 205 aaPredicted RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 CDKN2CP42773 168 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 HNRNPFP52597 415 aaKnown RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 RIPK1Q13546 671 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 DEFB134Q4QY38 66 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 TMEM214Q6NUQ4 689 aaKnown RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 WDR74Q6RFH5 385 aaPredicted RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 FAM47BQ8NA70 645 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 N4BP2L2Q92802 583 aaPredicted RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 NAT6Q93015 286 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 CHRNA10Q9GZZ6 450 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 STARD5Q9NSY2 213 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 SLC25A37Q9NYZ2 338 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 SUCOQ9UBS9 1254 aaKnown RBP21.38■■□□□ 1.01
IRF3-201ENST00000309877 PCDHGB4Q9UN71 923 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 ASB4Q9Y574 426 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 U3KQA8 63 aa21.38■■□□□ 1.01
IRF3-201ENST00000309877 EME2A4GXA9 379 aaPredicted RBP21.37■■□□□ 1.01
IRF3-201ENST00000309877 B3GALT2O43825 422 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 TBX19O60806 448 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 C9P02748 559 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 EEFSECP57772 596 aaKnown RBP21.37■■□□□ 1.01
IRF3-201ENST00000309877 MTPNP58546 118 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 ACTR3P61158 418 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 CFHR1Q03591 330 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 MUM1Q2TAK8 710 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 GTDC1Q4AE62 458 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 RUNDC3AQ59EK9 446 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 SNAP47Q5SQN1 464 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 ZNF621Q6ZSS3 439 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 NATD1Q8N6N6 113 aa21.37■■□□□ 1.01
IRF3-201ENST00000309877 CIDECQ96AQ7 238 aaPredicted RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms