RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ZNF556Q9HAH1 456 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 SLC27A6Q9Y2P4 619 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 LTBP2Q14767 1821 aa11.04□□□□□ -0.64
PTPN2-201ENST00000309660 PRAMEF33A0A0G2JMD5 474 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PRAMEF10O60809 474 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PAPLNO95428 1278 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 HSMCR30P0CW71 290 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 MVDP53602 400 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 SLC35A2P78381 396 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 GPM6BQ13491 265 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CLCA4Q14CN2 919 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF829Q3KNS6 432 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TANGO2Q6ICL3 276 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 SLC16A12Q6ZSM3 486 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 OLIG3Q7RTU3 272 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 DSG4Q86SJ6 1040 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 FAM124AQ86V42 546 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 LRRTM4Q86VH4 590 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 P2RY8Q86VZ1 359 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 DCUN1D3Q8IWE4 304 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PHF10Q8WUB8 498 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 DNASE1L2Q92874 299 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CHFRQ96EP1 664 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ASB16Q96NS5 453 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CXorf36Q9H7Y0 433 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 A0A1W2PP55 124 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TRBC2A0A5B9 178 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 SH3PXD2BA1X283 911 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PDZK1P1A8MUH7 402 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PLPP1O14494 284 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PCDH17O14917 1159 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ADAMDEC1O15204 470 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 NADKO95544 446 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 HOXB6P17509 224 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ITIH1P19827 911 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PCMT1P22061 227 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ACADLP28330 430 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 KEAP1Q14145 624 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PERM1Q5SV97 790 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 FAM71E1Q6IPT2 247 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 DHRS4L2Q6PKH6 230 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ADCK1Q86TW2 530 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TSPYL5Q86VY4 417 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 LAS2Q8IYD9 372 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ENTHD1Q8IYW4 607 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 METTL4Q8N3J2 472 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TMIEQ8NEW7 156 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ABHD11Q8NFV4 315 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 JPH3Q8WXH2 748 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 POP5Q969H6 163 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 UBE2E3Q969T4 207 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 C12orf66Q96MD2 445 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 COPS4Q9BT78 406 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 OR52A5Q9H2C5 316 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PRSS16Q9NQE7 514 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 MBNL1Q9NR56 388 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 LMCD1Q9NZU5 365 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TAAR2Q9P1P5 351 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ATP6V1HQ9UI12 483 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 ENPP5Q9UJA9 477 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 NDRG4Q9ULP0 352 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 MAPRE3Q9UPY8 281 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 DOCK9Q9BZ29 2069 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CCDC88CQ9P219 2028 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 FOXE1O00358 373 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PCSK2P16519 638 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TPP2P29144 1249 aaPredicted RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 GPC1P35052 558 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 OPRL1P41146 370 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CLK1P49759 484 aaKnown RBP11.03□□□□□ -0.64
PTPN2-201ENST00000309660 WSCD2Q2TBF2 565 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 VN1R5Q7Z5H4 357 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 SLC9B2Q86UD5 537 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 PDZD3Q86UT5 571 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 OXR1Q8N573 874 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 UCN3Q969E3 161 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 AIF1LQ9BQI0 150 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 CHST8Q9H2A9 424 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 EHD1Q9H4M9 534 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 EPHX3Q9H6B9 360 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TRPC4Q9UBN4 977 aa11.03□□□□□ -0.64
PTPN2-201ENST00000309660 TPST2O60704 377 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 TNFRSF21O75509 655 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 DSTNP60981 165 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 CDK3Q00526 305 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 MVKQ03426 396 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 DUSP7Q16829 419 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 PNCKQ6P2M8 343 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 GPR155Q7Z3F1 870 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 BTLAQ7Z6A9 289 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.65
PTPN2-201ENST00000309660 YAF2Q8IY57 180 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 ANKRD53Q8N9V6 530 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 FKBP10Q96AY3 582 aa11.02□□□□□ -0.65
PTPN2-201ENST00000309660 METTL2AQ96IZ6 378 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms