RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 HNRNPFP52597 415 aaKnown RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 ARSFP54793 590 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 MTTPP55157 894 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 FOXL2P58012 376 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 RAB15P59190 212 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 ERVK-8P63133 956 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 RPL38P63173 70 aaKnown RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 GABREP78334 506 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 PHEXP78562 749 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 MAT1AQ00266 395 aaKnown RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 MC1RQ01726 317 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 SLAMF1Q13291 335 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 HERC3Q15034 1050 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 IMPG1Q17R60 797 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 ATP6AP1LQ52LC2 224 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 SPIN4Q56A73 249 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 DCAF12Q5T6F0 453 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 C1orf189Q5VU69 101 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 IL23RQ5VWK5 629 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 TRIM40Q6P9F5 258 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 CEACAM20Q6UY09 585 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 MED25Q71SY5 747 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 ABHD13Q7L211 337 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 TMEM126BQ8IUX1 230 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 RIMKLAQ8IXN7 391 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 DSELQ8IZU8 1212 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 CA13Q8N1Q1 262 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 METTL27Q8N6F8 245 aaPredicted RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 SRFBP1Q8NEF9 429 aaKnown RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 C16orf78Q8WTQ4 265 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 N4BP2L2Q92802 583 aaPredicted RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 MVB12AQ96EY5 273 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 LRFN5Q96NI6 719 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 SERINC2Q96SA4 455 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 SIKE1Q9BRV8 207 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 C1orf50Q9BV19 199 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 EBPLQ9BY08 206 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 NRSN2Q9GZP1 204 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 FAM107BQ9H098 131 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 FANCEQ9HB96 536 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 TCF7L2Q9NQB0 619 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 RIC8BQ9NVN3 520 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 TEX10Q9NXF1 929 aaPredicted RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 AKAP7Q9P0M2 348 aaPredicted RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 HEY2Q9UBP5 337 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 MCM8Q9UJA3 840 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 DAPP1Q9UN19 280 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 POLR3HQ9Y535 204 aaPredicted RBP8.97□□□□□ -0.97
RFX3-201ENST00000302303 MAU2Q9Y6X3 613 aa8.97□□□□□ -0.97
RFX3-201ENST00000302303 SDK2Q58EX2 2172 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 IGLV3-12A0A075B6K2 115 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 TRABD2BA6NFA1 517 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 OR2W5A6NFC9 320 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 URADA6NGE7 173 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 E9PBE3 544 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 MEN1O00255 615 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 CHST10O43529 356 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 PCDH7O60245 1069 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 KLHL41O60662 606 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 VPS4BO75351 444 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 PRKRAO75569 313 aaKnown RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 STK17BO94768 372 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 FAM58BPP0C7Q3 252 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ALAS2P22557 587 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 IL12AP29459 219 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 SLC5A2P31639 672 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 SSR2P43308 183 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ID4P47928 161 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 MRPL19P49406 292 aaKnown RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 ARFIP2P53365 341 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 LIM2P55344 173 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ACSM2AQ08AH3 577 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 FOXC1Q12948 553 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 NDUFA9Q16795 377 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 MPEG1Q2M385 716 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ACSM2BQ68CK6 577 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 C18orf63Q68DL7 685 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 FAM71E1Q6IPT2 247 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 FAM199XQ6PEV8 388 aaPredicted RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 FOXR1Q6PIV2 292 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 CPLX4Q7Z7G2 160 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 LAPTM4BQ86VI4 370 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 NUDT13Q86X67 352 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 DTX1Q86Y01 620 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 TTC29Q8NA56 475 aaPredicted RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 FNDC5Q8NAU1 212 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 MMABQ96EY8 250 aaPredicted RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 MARK4Q96L34 752 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 CSF3RQ99062 836 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ZPBPQ9BS86 351 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 NDC1Q9BTX1 674 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 SCNM1Q9BWG6 230 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 NPLQ9BXD5 320 aaPredicted RBP8.96□□□□□ -0.97
RFX3-201ENST00000302303 NLNQ9BYT8 704 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ASPSCR1Q9BZE9 553 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 BRINP2Q9C0B6 783 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 ANKHQ9HCJ1 492 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 SLC52A3Q9NQ40 469 aa8.96□□□□□ -0.97
RFX3-201ENST00000302303 LANCL2Q9NS86 450 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms