RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 DRGXA6NNA5 263 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 M0R3H8 397 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 TEX28O15482 410 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 HNMTP50135 292 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 RORCP51449 518 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ABATP80404 500 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 GRIN2CQ14957 1233 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 MTFR2Q6P444 385 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 CYHR1Q6ZMK1 362 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 RBM12BQ8IXT5 1001 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 CADM2Q8N3J6 435 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 PEX13Q92968 403 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ARSGQ96EG1 525 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 CENPOQ9BU64 300 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ELAC1Q9H777 363 aaKnown RBP12.78□□□□□ -0.36
CASC4-201ENST00000299957 ACOT13Q9NPJ3 140 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 ZNF232Q9UNY5 417 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
CASC4-201ENST00000299957 DNAH12Q6ZR08 3092 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 ABHD14A-ACY1A0A1B0GW23 586 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 RB1P06400 928 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 MRPL3P09001 348 aaKnown RBP12.77□□□□□ -0.36
CASC4-201ENST00000299957 PPP5CP53041 499 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 SEC13P55735 322 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 ZNF763Q0D2J5 394 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 PRR14Q9BWN1 585 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 SLC2A11Q9BYW1 496 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 UCK2Q9BZX2 261 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 IL1RAPQ9NPH3 570 aa12.77□□□□□ -0.36
CASC4-201ENST00000299957 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 PIM1P11309 404 aaPredicted RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 PAX3P23760 479 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 CA5AP35218 305 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 HOXD12P35452 270 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 CSNK1DP48730 415 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 DGKGP49619 791 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 ITGA1P56199 1179 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 ADARB1P78563 741 aaKnown RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 SLC3A1Q07837 685 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 TSPYL5Q86VY4 417 aaPredicted RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 ZSWIM9Q86XI8 627 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 CADM3Q8N126 398 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 C12orf76Q8N812 135 aaPredicted RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 WDR48Q8TAF3 677 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 SLC35G5Q96KT7 338 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 TSSK6Q9BXA6 273 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 RLIMQ9NVW2 624 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 PHIPQ8WWQ0 1821 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 HTR3EA5X5Y0 456 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 TMEM202A6NGA9 273 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 ARHGEF33A8MVX0 844 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 TOXO94900 526 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 PAK4O96013 591 aaPredicted RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 S100A1P23297 94 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 CD40LGP29965 261 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 LIPAP38571 399 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 HYAL2Q12891 473 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 ODF4Q2M2E3 257 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 C2orf27AQ580R0 203 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 BEND5Q7L4P6 421 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 CELF2-AS1Q8N7Q2 184 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 OR5D16Q8NGK9 328 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 SMG7Q92540 1137 aaKnown RBP12.77□□□□□ -0.37
CASC4-201ENST00000299957 FAIM2Q9BWQ8 316 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 TBC1D14Q9P2M4 693 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 FBXO10Q9UK96 956 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 Q9Y3F1 56 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
CASC4-201ENST00000299957 PCDHGA12O60330 932 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 PRKAR1AP10644 381 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 SRCP12931 536 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 TIE1P35590 1138 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 RPL34P49207 117 aaKnown RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 HBA1P69905 142 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 CAP1Q01518 475 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 KCNC4Q03721 635 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 AMZ2Q86W34 360 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 OR4N5Q8IXE1 308 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 OR14C36Q8NHC7 312 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 NARS2Q96I59 477 aaKnown RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 QRFPRQ96P65 431 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 MMP27Q9H306 513 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 VNN3Q9NY84 501 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 RPS6KB2Q9UBS0 482 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 NUFIP1Q9UHK0 495 aaKnown RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 PEX11BO96011 259 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms