RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ATAD3CQ5T2N8 411 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 DPY19L3Q6ZPD9 716 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 GPAT4Q86UL3 456 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PHOSPHO1Q8TCT1 267 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 HERVK_113Q902F9 699 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 SLC6A7Q99884 636 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 MKRN2Q9H000 416 aaKnown RBP5.38□□□□□ -1.55
CPSF2-201ENST00000298875 OR10A4Q9H209 315 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 USP29Q9HBJ7 922 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 CRTAC1Q9NQ79 661 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 FBXW11Q9UKB1 542 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 NAP1L6A6NFF2 107 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 MT-ND2P03891 347 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 CSF2P04141 144 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 BLOC1S1P78537 153 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 CAP1Q01518 475 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PLEKHG7Q6ZR37 379 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 MOB2Q70IA6 237 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 RNF130Q86XS8 419 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 METTL4Q8N3J2 472 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 VGLL2Q8N8G2 317 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 COL21A1Q96P44 957 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 OR14A2Q96R54 314 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PKP2Q99959 881 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 RGCCQ9H4X1 137 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 DKKL1Q9UK85 242 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 INPPL1O15357 1258 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 NIPSNAP2O75323 286 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 LAG3P18627 525 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PBX3P40426 434 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ZNF404Q494X3 552 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PHF19Q5T6S3 580 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 SIMC1Q8NDZ2 872 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TMEM41AQ96HV5 264 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 KLHL15Q96M94 604 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 EPYCQ99645 322 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 METTL7AQ9H8H3 244 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ENAMQ9NRM1 1142 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 C14orf119Q9NWQ9 140 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ZDHHC2Q9UIJ5 367 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TLR6Q9Y2C9 796 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 A8MT66 165 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 AGAP14A8MT82 685 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 GABBR2O75899 941 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PRPS1L1P21108 318 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ELK4P28324 431 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ELOAQ14241 798 aaKnown RBP5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PRAMEF14Q5SWL7 426 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PRAMEF13Q5VWM6 474 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TMEM198Q66K66 360 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 ENPP7Q6UWV6 458 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 FAM109AQ8N4B1 249 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 OR13C3Q8NGS6 347 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 CLEC4CQ8WTT0 213 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 PHOX2BQ99453 314 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 TFB2MQ9H5Q4 396 aaKnown RBP5.38□□□□□ -1.55
CPSF2-201ENST00000298875 SERINC1Q9NRX5 453 aa5.38□□□□□ -1.55
CPSF2-201ENST00000298875 RPH3AQ9Y2J0 694 aaPredicted RBP5.38□□□□□ -1.55
CPSF2-201ENST00000298875 WNT7AO00755 349 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 PRAF2O60831 178 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 DLSTP36957 453 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 OGDHQ02218 1023 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 ARSIQ5FYB1 569 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 MTFR2Q6P444 385 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 FUT10Q6P4F1 479 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 LILRB4Q8NHJ6 448 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 MAN2C1Q9NTJ4 1040 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 ZNF225Q9UK10 706 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 HSPE1-MOB4S4R3N1 261 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 SPEF2Q9C093 1822 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 CLIC1O00299 241 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 MUSKO15146 869 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 MITFO75030 526 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-201ENST00000298875 B3GALNT1O75752 331 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 CST3P01034 146 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-201ENST00000298875 ALPIP09923 528 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 GTF2F2P13984 249 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 HOXD12P35452 270 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 KCNJ5P48544 419 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 PTP4A2Q12974 167 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 PPIGQ13427 754 aaKnown RBP eCLIP5.37□□□□□ -1.55
CPSF2-201ENST00000298875 RFTN1Q14699 578 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-201ENST00000298875 GNMTQ14749 295 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 KANK2Q63ZY3 851 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 CEACAM20Q6UY09 585 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 TAC4Q86UU9 113 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 SAMD14Q8IZD0 417 aaPredicted RBP5.37□□□□□ -1.55
CPSF2-201ENST00000298875 OSTF1Q92882 214 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 OR52B2Q96RD2 323 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 POTEKPQ9BYX7 375 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 OSBPL7Q9BZF2 842 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 NANSQ9NR45 359 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 TAS2R10Q9NYW0 307 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 RHCGQ9UBD6 479 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 CACNG4Q9UBN1 327 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 EXTL2Q9UBQ6 330 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 CCDC163A0A0D9SF12 145 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 H0YGN5 161 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 GKN3PP0CG01 181 aa5.37□□□□□ -1.55
CPSF2-201ENST00000298875 C8orf89P0DMQ9 161 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms