RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 CTF1Q16619 201 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HNRNPA1L2Q32P51 320 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 LRIF1Q5T3J3 769 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 TTC23LQ6PF05 361 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SHQ1Q6PI26 577 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 AMZ2Q86W34 360 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SLC5A8Q8N695 610 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 WDR20Q8TBZ3 569 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DNASE1L2Q92874 299 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 MUL1Q969V5 352 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DPP7Q9UHL4 492 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 YBX2Q9Y2T7 364 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ARHGEF17Q96PE2 2063 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ASXL3Q9C0F0 2248 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SMIM30A4D0T7 59 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 TNFRSF11BO00300 401 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 FRS3O43559 492 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 PRNPP04156 253 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HOXA9P31269 272 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 GJA4P35212 333 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HNMTP50135 292 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 RPS3AP61247 264 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HTRA4P83105 476 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 EPS8Q12929 822 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 NPRL3Q12980 569 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SLC13A2Q13183 592 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 PPIGQ13427 754 aaKnown RBP eCLIP12.94□□□□□ -0.349e-8■■□□□ 14
TTC39B-201ENST00000297615 OR4N5Q8IXE1 308 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 FKBP10Q96AY3 582 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 TAMM41Q96BW9 452 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DOK1Q99704 481 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 WFDC6Q9BQY6 131 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SLC6A16Q9GZN6 736 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 PRSS16Q9NQE7 514 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 CCDC177Q9NQR7 707 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 RPS6KA6Q9UK32 745 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 HCN2Q9UL51 889 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 PLXND1Q9Y4D7 1925 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ZNF860A6NHJ4 632 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DNTTP04053 509 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 CBSLP0DN79 551 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ZNF30P17039 623 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 IDSP22304 550 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 CBSP35520 551 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 CRISP3P54108 245 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SNRPNP63162 240 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 SRSF5Q13243 272 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 DHRS4L2Q6PKH6 230 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 TMIGD1Q6UXZ0 262 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ERN2Q76MJ5 926 aaKnown RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
TTC39B-201ENST00000297615 PJA1Q8NG27 643 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 OR9A1PQ8NGU1 263 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 UBTD2Q8WUN7 234 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ZHX1-C8orf76Q96EF9 292 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 CEP295NLQ96MC4 621 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 COPS4Q9BT78 406 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ADPRHL2Q9NX46 363 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 ENPP5Q9UJA9 477 aa12.94□□□□□ -0.34
TTC39B-201ENST00000297615 GRXCR2A6NFK2 248 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 ZNF701M0R085 212 aaPredicted RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 UGT2B11O75310 529 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 EIF2S1P05198 315 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 FPR1P21462 350 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 PRLHRP49683 370 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 AP1S2P56377 157 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TRIM73Q86UV7 250 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 L3MBTL4Q8NA19 623 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TERB1Q8NA31 727 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 SETD9Q8NE22 299 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 NIPSNAP1Q9BPW8 284 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TRIT1Q9H3H1 467 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TM9SF3Q9HD45 589 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TEX10Q9NXF1 929 aaPredicted RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 RUVBL1Q9Y265 456 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 SNRNP200O75643 2136 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 CLDN25C9JDP6 229 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 SCN2BO60939 215 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 PSIP1O75475 530 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 BCHEP06276 602 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 PCMT1P22061 227 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 CDH3P22223 829 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 CD6P30203 668 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 GPC1P35052 558 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 SRSF11Q05519 484 aaKnown RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 RGNQ15493 299 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms