RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 RGS10O43665 173 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 GPR37L1O60883 481 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CLPXO76031 633 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CA3P07451 260 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CD6P30203 668 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 SLC19A1P41440 591 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 MAPK9P45984 424 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CLCNKAP51800 687 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 C21orf58P58505 322 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 KEAP1Q14145 624 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 SYT16Q17RD7 645 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 GAB4Q2WGN9 574 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 IFI44LQ53G44 452 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 FAM71E1Q6IPT2 247 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 HMGN2P46Q86SG4 172 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 C17orf64Q86WR6 236 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 NLGN4XQ8N0W4 816 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 LGI4Q8N135 537 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 DNASE1L2Q92874 299 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 BORCS5Q969J3 196 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 EXOSC8Q96B26 276 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PLEKHA8Q96JA3 519 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 MACROD1Q9BQ69 325 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 OR52A5Q9H2C5 316 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 IGFLR1Q9H665 355 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 EPHX3Q9H6B9 360 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 TAAR2Q9P1P5 351 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 SNX11Q9Y5W9 270 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PRAMEF33A0A0G2JMD5 474 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PLPP1O14494 284 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PRAMEF10O60809 474 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 TNFRSF21O75509 655 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 MAPK12P53778 367 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 NCS1P62166 190 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 NR1D2Q14995 579 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CYP2A13Q16696 494 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 EGFLAMQ63HQ2 1017 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 TRIM40Q6P9F5 258 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 CAMKMTQ7Z624 323 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 BTLAQ7Z6A9 289 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 METTL4Q8N3J2 472 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 TMIEQ8NEW7 156 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 OR52N2Q8NGI0 321 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.1■□□□□ 0.012e-10■■■■■ 48.9
NCKIPSD-201ENST00000294129 HCAR2Q8TDS4 363 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 UCN3Q969E3 161 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 ASB16Q96NS5 453 aa15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 GPN2Q9H9Y4 310 aaPredicted RBP15.1■□□□□ 0.01
NCKIPSD-201ENST00000294129 PPM1DO15297 605 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 MID1O15344 667 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 WBP4O75554 376 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ACP5P13686 325 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 HOXB6P17509 224 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 C21orf33P30042 268 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 OPRL1P41146 370 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 MVKQ03426 396 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ITGADQ13349 1161 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 CTF1Q16619 201 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ZNF829Q3KNS6 432 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 TMEM236Q5W0B7 351 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SLCO6A1Q86UG4 719 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 TSPYL5Q86VY4 417 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SNX29P2Q8IUI4 249 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ABHD11Q8NFV4 315 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 POP5Q969H6 163 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 METTL2AQ96IZ6 378 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 CNDP2Q96KP4 475 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 CXorf36Q9H7Y0 433 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SPTBN5Q9NRC6 3674 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 WASHC1A8K0Z3 465 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 M0R3G1 203 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PCDH17O14917 1159 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PAK4O96013 591 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PCSK2P16519 638 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 POU1F1P28069 291 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 MANFP55145 182 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 CLCA4Q14CN2 919 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SPDYE7PQ495Y7 208 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 FAHD1Q6P587 224 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 CEACAM20Q6UY09 585 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 WASH2PQ6VEQ5 465 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PDZD3Q86UT5 571 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 KLHDC8AQ8IYD2 350 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 TMCO5AQ8N6Q1 288 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ANKRD53Q8N9V6 530 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SP7Q8TDD2 431 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 ZNF514Q96K75 400 aaPredicted RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 DPEP2Q9H4A9 486 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PRSS16Q9NQE7 514 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 RNF6Q9Y252 685 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 PCDHGA6Q9Y5G7 932 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 BCHEP06276 602 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 RB1P06400 928 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 KELP23276 732 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 HNRNPFP52597 415 aaKnown RBP15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 SLC9B2Q86UD5 537 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 DCUN1D3Q8IWE4 304 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 C7orf61Q8IZ16 206 aa15.09■□□□□ 0.01
NCKIPSD-201ENST00000294129 KRT78Q8N1N4 520 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms