RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 JPH3Q8WXH2 748 aaPredicted RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TIFAQ96CG3 184 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 MYEOVQ96EZ4 313 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 APIPQ96GX9 242 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 IGSF21Q96ID5 467 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 COL21A1Q96P44 957 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 OLAHQ9NV23 265 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 MROH6A6NGR9 719 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TMEM88BA6NKF7 163 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 HLA-EP13747 358 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 RPL3P39023 403 aaKnown RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 GNA13Q14344 377 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CLEC12AQ5QGZ9 265 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 C9orf64Q5T6V5 341 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 FRRS1Q6ZNA5 592 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TMEM173Q86WV6 379 aaPredicted RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 MMAAQ8IVH4 418 aaKnown RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TSPEARQ8WU66 669 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CCDC3Q9BQI4 270 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 GULP1Q9UBP9 304 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ACSL6Q9UKU0 697 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CNOT11Q9UKZ1 510 aaKnown RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 QSOX1O00391 747 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 OR1F1O43749 312 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 PCCBP05166 539 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CSN2P05814 226 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 EPHX1P07099 455 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SMIM18P0DKX4 95 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 LAG3P18627 525 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 LHCGRP22888 699 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ACRV1P26436 265 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 OCLNQ16625 522 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 NCEH1Q6PIU2 408 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 BEND5Q7L4P6 421 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 RAB8BQ92930 207 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 CLIP3Q96DZ5 547 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 DPAGT1Q9H3H5 408 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SLC39A1Q9NY26 324 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 RP1L1Q8IWN7 2480 aaPredicted RBP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 A0A1W2PRB8 838 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SH3D21A4FU49 640 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 METTL21EPA6NDL7 271 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TSPAN6O43657 245 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 MSL3P1P0C860 447 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 PSMD8P48556 350 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ADAM8P78325 824 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SCARB2Q14108 478 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 FBXO43Q4G163 708 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 LY6G5CQ5SRR4 150 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 PELI3Q8N2H9 469 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TMEM151AQ8N4L1 468 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 SPERTQ8NA61 448 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 TMED9Q9BVK6 235 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 ZNF69Q9UC07 566 aa12.09□□□□□ -0.47
SLC6A1-201ENST00000287766 EP400Q96L91 3159 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 C2orf92A0A1B0GVN3 265 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 CAPN15O75808 1086 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 C6orf47O95873 294 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 KLKB1P03952 638 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 DNASE1P24855 282 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 TAS2R50P59544 299 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 GATAD2BQ8WXI9 593 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 KLHL6Q8WZ60 621 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 CD93Q9NPY3 652 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 NUFIP1Q9UHK0 495 aaKnown RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ASB1Q9Y576 335 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 POLR2AP24928 1970 aaKnown RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 MTHFD2P13995 350 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 GGT1P19440 569 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ST3GAL4Q11206 333 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 HNRNPA0Q13151 305 aaKnown RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 CRB2Q5IJ48 1285 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 CTSL3PQ5NE16 218 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ADNP2Q6IQ32 1131 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ARL9Q6T311 187 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 OR8J3Q8NGG0 315 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 NPLQ9BXD5 320 aaPredicted RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 OARD1Q9Y530 152 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 PCDHGA8Q9Y5G5 932 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ALG5Q9Y673 324 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 NPIPB15A6NHN6 443 aaPredicted RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 STK25O00506 426 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 DLGAP1O14490 977 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 BCAS1O75363 584 aaPredicted RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 ALPPL2P10696 532 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 FPR1P21462 350 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 LCN1P31025 176 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 RFLNAQ6ZTI6 216 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 TAS2R3Q9NYW6 316 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 DEC1Q9P2X7 70 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 FBXW2Q9UKT8 454 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 DLGAP4Q9Y2H0 992 aa12.08□□□□□ -0.48
SLC6A1-201ENST00000287766 M0R036 132 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms