RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ZFP3Q96NJ6 502 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 EPYCQ99645 322 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 DOHHQ9BU89 302 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 RBCK1Q9BYM8 510 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 TRIM2Q9C040 744 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 ZDHHC7Q9NXF8 308 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 OR1A2Q9Y585 309 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 TAF1P21675 1872 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 OR5K4A6NMS3 321 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 CLCN2P51788 898 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 RPP38P78345 283 aaKnown RBP13.45□□□□□ -0.26
CDH3-201ENST00000264012 PUM1Q14671 1186 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDH3-201ENST00000264012 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 CARM1Q86X55 608 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 BBS10Q8TAM1 723 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 GTPBP2Q9BX10 602 aaKnown RBP13.45□□□□□ -0.26
CDH3-201ENST00000264012 DSN1Q9H410 356 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 IL21RQ9HBE5 538 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 ARNT2Q9HBZ2 717 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
CDH3-201ENST00000264012 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
CDH3-201ENST00000264012 COL16A1Q07092 1604 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 AP3S2P59780 193 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 TAZQ16635 292 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MPP7Q5T2T1 576 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 SHQ1Q6PI26 577 aaKnown RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 ARL9Q6T311 187 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 AMIGO1Q86WK6 493 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 GPR26Q8NDV2 337 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 GPR174Q9BXC1 333 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 RNF38Q9H0F5 515 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 KLHL31Q9H511 634 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 GPN1Q9HCN4 374 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 MYH9P35579 1960 aaKnown RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 ABCB7O75027 752 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 PENKP01210 267 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 IFI30P13284 250 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 ATF6P18850 670 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 OC90Q02509 493 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 LETMD1Q6P1Q0 360 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 CDH24Q86UP0 819 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 UBE2J2Q8N2K1 259 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 TCEANCQ8N8B7 351 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 TMCO6Q96DC7 493 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 DPH2Q9BQC3 489 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 C1QTNF1Q9BXJ1 281 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 LOC285095A0A1B0GVY8 99 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 FEZF1A0PJY2 475 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 FAM214AQ32MH5 1076 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 UNC5DQ6UXZ4 953 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 HTR3DQ70Z44 454 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 ASRGL1Q7L266 308 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MARCH9Q86YJ5 346 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 OR2AJ1Q8NGZ0 328 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 ARRDC2Q8TBH0 407 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 RHBDF1Q96CC6 855 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MND1Q9BWT6 205 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 SLC46A2Q9BY10 475 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 SLC17A9Q9BYT1 436 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 NKX2-4Q9H2Z4 354 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 RMI1Q9H9A7 625 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 MYH4Q9Y623 1939 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 A0A075B6Q4 140 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 TNFRSF10BO14763 440 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 KHNYNO15037 678 aaKnown RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 TACSTD2P09758 323 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 BCAP31P51572 246 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 ZNF140P52738 457 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 ZNF423Q2M1K9 1284 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 CATSPEREQ5SY80 951 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 CPXM2Q8N436 756 aa13.44□□□□□ -0.26
CDH3-201ENST00000264012 TRMT2BQ96GJ1 504 aaKnown RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 SOX17Q9H6I2 414 aaPredicted RBP13.44□□□□□ -0.26
CDH3-201ENST00000264012 MYO18AQ92614 2054 aaKnown RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 PDCD5O14737 125 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 FGF4P08620 206 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 GMFBP60983 142 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 GFOD2Q3B7J2 385 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 ZFP69Q49AA0 526 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PJA1Q8NG27 643 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 FBXL8Q96CD0 374 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 SORT1Q99523 831 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 TMEM165Q9HC07 324 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 ALKBH4Q9NXW9 302 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 GPRC5BQ9NZH0 403 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 STOX2Q9P2F5 926 aaPredicted RBP13.43□□□□□ -0.26
CDH3-201ENST00000264012 DKK3Q9UBP4 350 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 PIAS3Q9Y6X2 628 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 H0YAE9 185 aa13.43□□□□□ -0.26
CDH3-201ENST00000264012 KLK3P07288 261 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms