RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 IL5RAQ01344 420 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 GRSF1Q12849 480 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 TP53BP2Q13625 1128 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 GTF2IRD2BQ6EKJ0 949 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 UBE2Q1Q7Z7E8 422 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 GTF2IRD2Q86UP8 949 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF761Q86XN6 746 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 RNF130Q86XS8 419 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 OR4E2Q8NGC2 313 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 OR10G6Q8NH81 332 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 PSMA8Q8TAA3 256 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 UBE2FQ969M7 185 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 RNF31Q96EP0 1072 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 INSM2Q96T92 566 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC35A5Q9BS91 424 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 AMBRA1Q9C0C7 1298 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 AMBNQ9NP70 447 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 VNN3Q9NY84 501 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 ZFR2Q9UPR6 939 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-201ENST00000257604 TDRD6O60522 2096 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 ISM1B1AKI9 464 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 EIF3FO00303 357 aaPredicted RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 SCAMP2O15127 329 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 PAPLNO95428 1278 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 UMPSP11172 480 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 PSMB9P28065 219 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 ALDH3A2P51648 485 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 PPP2CBP62714 309 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 PPP2CAP67775 309 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 SMN1Q16637 294 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 EID3Q8N140 333 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 AMER3Q8N944 861 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 HMGB4Q8WW32 186 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 HSH2DQ96JZ2 352 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 CTPS2Q9NRF8 586 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 KLHL42Q9P2K6 505 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 SAMHD1Q9Y3Z3 626 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 CLDN25C9JDP6 229 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 NADKO95544 446 aaPredicted RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 EGFP01133 1207 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 ACADMP11310 421 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC19A1P41440 591 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 WNT3P56703 355 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 NCS1P62166 190 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 SRSF11Q05519 484 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 CD47Q08722 323 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 GANABQ14697 944 aaKnown RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 DMRT3Q9NQL9 472 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 TMEM9Q9P0T7 183 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 SCHIP1Q9P0W5 487 aaPredicted RBP14□□□□□ -0.17
TRAFD1-201ENST00000257604 SEC16AO15027 2179 aa14□□□□□ -0.17
TRAFD1-201ENST00000257604 LINC00854A0A1B0GVQ3 168 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PI15O43692 258 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 NPPAP01160 153 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 MAPK12P53778 367 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 VLDLRP98155 873 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 KCNAB2Q13303 367 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 GGTA1PQ4G0N0 100 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 TMEM196Q5HYL7 178 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC16A12Q6ZSM3 486 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC17A9Q9BYT1 436 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 OR52A5Q9H2C5 316 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ANKRA2Q9H9E1 313 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SPATA6Q9NWH7 488 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 FAM118AQ9NWS6 357 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PAK1IP1Q9NWT1 392 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PDP1Q9P0J1 537 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 TMED5Q9Y3A6 229 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 H0YIV9 168 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PSMD11O00231 422 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 KPNA4O00629 521 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 RNGTTO60942 597 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 KCNK5O95279 499 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 IDSP22304 550 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF763Q0D2J5 394 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CSTF3Q12996 717 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 VMACQ2NL98 169 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 C6orf141Q5SZD1 244 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 Q6ZPB1 254 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CEP68Q76N32 757 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 NLRP8Q86W28 1048 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 GALNT13Q8IUC8 556 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 RIMKLAQ8IXN7 391 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CLIP4Q8N3C7 705 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CHDHQ8NE62 594 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 NFKBIDQ8NI38 313 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SIPA1Q96FS4 1042 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PYURFQ96I23 114 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ASPSCR1Q9BZE9 553 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 PHPT1Q9NRX4 125 aaPredicted RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 DCAF13Q9NV06 445 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 NARSO43776 548 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 LCMT2O60294 686 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 TPST2O60704 377 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SCELO95171 688 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 RASGRP1O95267 797 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 COL9A1P20849 921 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 KELP23276 732 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms