RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 ZFYVE19Q96K21 471 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 LAMA1P25391 3075 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 UPK1BO75841 260 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 CCNB2O95067 398 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 GASTP01350 101 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 IGHA2P01877 340 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 CSF2P04141 144 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 FHP07954 510 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 SSTR4P31391 388 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 GGT2P36268 569 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 RNF144AP50876 292 aaPredicted RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 RAE1P78406 368 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 ZC3H12BQ5HYM0 836 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 PLPP4Q5VZY2 271 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 LIPJQ5W064 366 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TPGS2Q68CL5 300 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TRIM40Q6P9F5 258 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TCEANCQ8N8B7 351 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 ZFP41Q8N8Y5 198 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 DNAJB8Q8NHS0 232 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 IPCEF1Q8WWN9 437 aaPredicted RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 PRR14Q9BWN1 585 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 DNMT3BQ9UBC3 853 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 B3GNT3Q9Y2A9 372 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 SNX11Q9Y5W9 270 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 PDZK1P1A8MUH7 402 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 ERAL1O75616 437 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 ALOX5P09917 674 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 CCR2P41597 374 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 PIK3CBP42338 1070 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 GPR1P46091 355 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 ASMTP46597 345 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 FAM214AQ32MH5 1076 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TYW3Q6IPR3 259 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 SYNPOQ8N3V7 929 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 DTX3Q8N9I9 347 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 DOK4Q8TEW6 326 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 HRASLS5Q96KN8 279 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 IFT52Q9Y366 437 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TMEM221A6NGB7 291 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 AGAP5A6NIR3 686 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 IFNW1P05000 195 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ZNF8P17098 575 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 JUNDP17535 347 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 EIF2DP41214 584 aaKnown RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 ZNF763Q0D2J5 394 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 SELENBP1Q13228 472 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 PLEKHS1Q5SXH7 462 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 CBARPQ8N350 705 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 KBTBD8Q8NFY9 601 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ARMC5Q96C12 935 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 F2RL3Q96RI0 385 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 NLNQ9BYT8 704 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 REEP4Q9H6H4 257 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 CLN6Q9NWW5 311 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ZNF226Q9NYT6 803 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ZNF282Q9UDV7 671 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 ANTXRLA6NF34 631 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 WASH3PC4AMC7 463 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 GFYI3L273 518 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 GREM1O60565 184 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 MMP20O60882 483 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 GCM2O75603 506 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 CDK1P06493 297 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 CYP2A6P11509 494 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 MAGEA8P43361 318 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 RGS6P49758 472 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ALDH6A1Q02252 535 aaKnown RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 TARDBPQ13148 414 aaKnown RBP eCLIP12.92□□□□□ -0.34
VHL-201ENST00000256474 CCDC92Q53HC0 331 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 LIPKQ5VXJ0 399 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 WDR20Q8TBZ3 569 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 EHD1Q9H4M9 534 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 GPATCH2Q9NW75 528 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 TRBV4-1A0A0J9YWV2 114 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 AP3D1O14617 1153 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ENTPD6O75354 484 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 WASP42768 502 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 ZMAT1Q5H9K5 638 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 OR8J2Q8NGG1 315 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 GLYATL1Q969I3 302 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 NMNAT1Q9HAN9 279 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 IL20RAQ9UHF4 553 aa12.92□□□□□ -0.34
VHL-201ENST00000256474 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
VHL-201ENST00000256474 SLC28A2O43868 658 aa12.91□□□□□ -0.34
VHL-201ENST00000256474 AP2A2O94973 939 aa12.91□□□□□ -0.34
VHL-201ENST00000256474 CH25HO95992 272 aa12.91□□□□□ -0.34
VHL-201ENST00000256474 PSMB5P28074 263 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms