RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 ITGA2P17301 1181 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 HNMTP50135 292 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 CRISP1P54107 249 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 CDC42P60953 191 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 CD83Q01151 205 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 PLD1Q13393 1074 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 TRIM60Q495X7 471 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 YIF1BQ5BJH7 314 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 IER5LQ5T953 404 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 FRMPD2BQ6IN97 320 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 REM2Q8IYK8 340 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-201ENST00000254810 LILRA3Q8N6C8 439 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-201ENST00000254810 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 MED8Q96G25 268 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 PIP5K1AQ99755 562 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 SLC35A5Q9BS91 424 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 SPATA9Q9BWV2 254 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 RERGLQ9H628 205 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 SGK2Q9HBY8 427 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 THSD1Q9NS62 852 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 CNOT2Q9NZN8 540 aaKnown RBP12.83□□□□□ -0.36
H3F3B-201ENST00000254810 HCN4Q9Y3Q4 1203 aa12.83□□□□□ -0.36
H3F3B-201ENST00000254810 SAP18O00422 153 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GREM1O60565 184 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CSF3P09919 207 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CTSOP43234 321 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 STK19P49842 368 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 NKX3-2P78367 333 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CHRNEQ04844 493 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CDH18Q13634 790 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 DUSP7Q16829 419 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GCNT6Q5T4J0 391 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SLC34A3Q8N130 599 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CBARPQ8N350 705 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CADM2Q8N3J6 435 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SIMC1Q8NDZ2 872 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 ZNF556Q9HAH1 456 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TRPV5Q9NQA5 729 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 C1GALT1Q9NS00 363 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 IGLV3-16A0A075B6K0 115 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 ARHGEF33A8MVX0 844 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 B4DXG7 233 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GADD45GO95257 159 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 MSL3P1P0C860 447 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 LIM2P55344 173 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GPLD1P80108 840 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 PUM1Q14671 1186 aaKnown RBP eCLIP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 LARS2Q15031 903 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SEC23BQ15437 767 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TEAD4Q15561 434 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SLC5A12Q1EHB4 618 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TIMM50Q3ZCQ8 353 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GPAT3Q53EU6 434 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 C17orf99Q6UX52 265 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 PAMR1Q6UXH9 720 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 NOXA1Q86UR1 476 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 MMP21Q8N119 569 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CELF5Q8N6W0 485 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 FBXO22Q8NEZ5 403 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CHTF18Q8WVB6 975 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 PKP4Q99569 1192 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CLN6Q9NWW5 311 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SNX11Q9Y5W9 270 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 NINQ8N4C6 2090 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 GNG14A0A1W2PPG7 69 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SGTAO43765 313 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 KLHL18O94889 574 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 OR1D2P34982 312 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 RPS13P62277 151 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SMAD3P84022 425 aaKnown RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 NAE1Q13564 534 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 MPPE1Q53F39 396 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 SMUG1Q53HV7 270 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 LIPKQ5VXJ0 399 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 LIPJQ5W064 366 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TTC23LQ6PF05 361 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 CAMKMTQ7Z624 323 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 HJURPQ8NCD3 748 aaPredicted RBP12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TMEM203Q969S6 136 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 WFDC6Q9BQY6 131 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 PRM3Q9NNZ6 103 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 FZD3Q9NPG1 666 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 REV1Q9UBZ9 1251 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 RAB23Q9ULC3 237 aa12.82□□□□□ -0.36
H3F3B-201ENST00000254810 TRBC2A0A5B9 178 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 SH3D21A4FU49 640 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 ZNF670-ZNF695F2Z2N8 137 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 RFXAPO00287 272 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 PLA2G10O15496 165 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 TPST2O60704 377 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 CDRT1O95170 752 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 OR56A5P0C7T3 313 aa12.81□□□□□ -0.36
H3F3B-201ENST00000254810 HOXD11P31277 338 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms